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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0216300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Lipolytic enzyme, G-D-S-L family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.85 (0.0137) R2 : 0.000971
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0191 (0.0288) R2dN8 : 0.00125 R2N8 : 0.000971
σ : 0.257
deviance : 30.37
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.11 0.251 2.85 -0.0811 0.0464 0.0537 -0.253 -0.348 0.0233 9.62 90 10 -- --
29.63 0.255 2.85 -0.113 0.0347 0.0396 -0.282 -- 0.0143 6.85 90 10 -- --
29.07 0.253 2.85 -0.104 0.0619 0.0807 -- -0.322 0.027 11.6 90 10 -- --
29.66 0.254 2.85 -0.124 0.0664 0.0706 -- -- 0.0237 11.7 90.28 2 -- --
29.27 0.253 2.86 -0.1 -- 0.0583 -- -0.331 0.0216 -- 90 10 -- --
29.75 0.256 2.85 -0.104 0.0475 -- -0.278 -- 0.0055 6.76 -- -- -- --
29.92 0.256 2.85 -0.108 0.0504 -- -- -- 0.00666 8.41 -- -- -- --
29.89 0.256 2.85 -0.118 -- 0.0453 -- -- 0.0169 -- 90 10 -- --
30.04 0.255 2.85 -- 0.0633 0.0591 -- -- 0.0339 11.4 90.36 2 -- --
30.06 0.256 2.85 -0.108 -- -- -- -- 0.00717 -- -- -- -- --
30.23 0.257 2.85 -- 0.05 -- -- -- 0.0187 8.57 -- -- -- --
30.25 0.256 2.85 -- -- 0.037 -- -- 0.0281 -- 90.54 2 -- --
30.37 0.257 2.85 -- -- -- -- -- 0.0191 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.60 atmosphere 1005.0 90 < th dose dependent rect. 7 1
15 24.68 wind 1.0 30 < th dose independent rect. 7 1
19 26.23 wind 3.0 30 < th dose dependent rect. 7 1
22 26.65 wind 9.0 10 > th dose independent rect. 18 1
25 26.65 wind 9.0 10 > th dose dependent rect. 18 1
34 26.89 wind 9.0 90 > th dose dependent rect. 16 10
52 26.96 humidity 90.0 10 > th dose independent rect. 7 1
135 27.09 humidity 90.0 90 > th dose dependent rect. 6 1
140 27.12 wind 9.0 90 > th dose independent sin 13 NA
143 27.15 atmosphere 1005.0 10 < th dose dependent rect. 4 5
144 27.17 atmosphere 1005.0 10 < th dose independent rect. 7 1
162 27.23 humidity 90.0 10 > th dose independent rect. 2 7
163 27.23 wind 9.0 90 > th dose dependent sin 13 NA
169 27.26 wind 9.0 90 > th dose independent rect. 13 13
248 27.41 wind 9.0 90 > th dose dependent rect. 13 5
253 27.43 humidity 80.0 10 > th dose dependent rect. 8 1
260 27.45 wind 9.0 90 > th dose dependent rect. 13 21
362 27.71 atmosphere 1010.0 10 < th dose dependent rect. 2 7
375 27.81 temperature 20.0 10 < th dose independent rect. 4 1
384 27.87 wind 9.0 90 < th dose independent sin 14 NA
399 27.94 humidity 90.0 10 > th dose independent rect. 24 9
410 27.97 humidity 60.0 14400 > th dose independent rect. 7 1
420 28.00 radiation 30.0 720 < th dose independent rect. 16 16
425 28.01 humidity 60.0 14400 > th dose independent rect. 5 3
429 28.02 humidity 60.0 14400 < th dose independent rect. 6 1
431 28.02 humidity 60.0 14400 < th dose independent rect. 20 1
433 28.02 radiation 20.0 14400 > th dose independent rect. 17 1
459 28.02 temperature 25.0 10 < th dose independent rect. 2 7
487 28.02 humidity 60.0 14400 < th dose dependent rect. 6 1
489 28.02 humidity 60.0 14400 < th dose dependent rect. 20 1
491 28.02 radiation 20.0 14400 > th dose dependent rect. 17 1
575 28.09 humidity 70.0 90 < th dose independent rect. 16 1
578 28.09 humidity 60.0 14400 > th dose independent rect. 1 7
596 28.11 humidity 60.0 14400 > th dose independent rect. 20 12
650 28.20 temperature 25.0 90 < th dose independent rect. 7 1
653 28.20 temperature 30.0 10 < th dose dependent rect. 2 7
656 28.22 temperature 25.0 10 < th dose independent rect. 7 1
660 28.22 radiation 1.0 1440 < th dose independent rect. 11 1
663 28.22 atmosphere 1005.0 270 < th dose independent rect. 3 5
666 28.22 radiation 1.0 1440 < th dose dependent rect. 11 1
669 28.23 humidity 90.0 10 > th dose independent sin 4 NA
671 28.23 humidity 70.0 10 > th dose dependent rect. 2 7
674 28.24 temperature 20.0 30 > th dose independent rect. 7 1
678 28.24 atmosphere 995.0 43200 < th dose independent rect. 9 19
682 28.25 atmosphere 995.0 43200 < th dose independent no NA NA
684 28.25 atmosphere 995.0 43200 < th dose independent rect. 10 17
685 28.25 atmosphere 995.0 43200 > th dose independent rect. 22 20
687 28.25 atmosphere 995.0 43200 < th dose independent rect. 8 21
688 28.25 atmosphere 995.0 43200 < th dose independent rect. 21 21
692 28.25 atmosphere 995.0 43200 > th dose independent rect. 1 23
696 28.25 atmosphere 995.0 43200 < th dose independent rect. 7 23
702 28.25 atmosphere 995.0 43200 < th dose dependent rect. 13 12
704 28.26 atmosphere 995.0 43200 > th dose independent rect. 9 18
707 28.26 atmosphere 995.0 43200 > th dose independent rect. 8 20
720 28.26 atmosphere 995.0 43200 > th dose independent rect. 18 22
739 28.26 atmosphere 995.0 43200 < th dose independent rect. 17 23
747 28.27 atmosphere 995.0 43200 > th dose independent no NA NA
750 28.27 atmosphere 995.0 43200 > th dose independent rect. 10 16
782 28.28 radiation 30.0 30 < th dose independent rect. 7 1
783 28.28 wind 1.0 30 > th dose independent rect. 2 2
806 28.29 wind 3.0 10 < th dose independent rect. 2 7
816 28.29 temperature 30.0 90 < th dose dependent rect. 2 1
824 28.29 atmosphere 995.0 43200 < th dose dependent rect. 12 15
826 28.30 atmosphere 995.0 43200 > th dose independent rect. 11 14
844 28.31 atmosphere 995.0 43200 < th dose independent sin 18 NA
881 28.32 atmosphere 995.0 43200 < th dose dependent sin 16 NA
890 28.33 atmosphere 995.0 43200 > th dose independent sin 18 NA
895 28.33 atmosphere 1005.0 10 < th dose independent rect. 3 6
911 28.33 wind 5.0 30 < th dose dependent rect. 2 6
933 28.34 atmosphere 995.0 43200 < th dose dependent rect. 11 18
979 28.35 temperature 30.0 10 < th dose dependent rect. 2 2
996 28.36 precipitation 0.1 720 < th dose independent rect. 16 16