Os01g0215000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lipolytic enzyme, G-D-S-L family protein.
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Os01g0215000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lipolytic enzyme, G-D-S-L family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 270.95 | 0.773 | 8.68 | -2.64 | 0.929 | -1.47 | 1.06 | -4.4 | -1.02 | 21.3 | 23.88 | 302 | 5.19 | 3.98 |
| 277.18 | 0.775 | 8.62 | -2.24 | 0.897 | -1.6 | 1.6 | -- | -0.87 | 21.5 | 23.88 | 291 | 5.17 | 3.45 |
| 272.23 | 0.768 | 8.69 | -2.65 | 0.888 | -1.53 | -- | -4.88 | -1 | 20.7 | 23.8 | 309 | 5 | 4.53 |
| 288.15 | 0.791 | 8.63 | -2.26 | 0.931 | -1.6 | -- | -- | -0.889 | 21.3 | 23.9 | 292 | 5.14 | 3.43 |
| 292.73 | 0.797 | 8.65 | -2.53 | -- | -1.96 | -- | -3.62 | -0.923 | -- | 23.11 | 326 | 3.85 | 6.35 |
| 321.01 | 0.84 | 8.71 | -2.33 | 1.5 | -- | 1.86 | -- | -1.12 | 21.7 | -- | -- | -- | -- |
| 333.36 | 0.855 | 8.71 | -2.4 | 1.51 | -- | -- | -- | -1.12 | 21.4 | -- | -- | -- | -- |
| 309.22 | 0.819 | 8.61 | -2.13 | -- | -2.05 | -- | -- | -0.822 | -- | 23.12 | 341 | 3.7 | 6.4 |
| 420.49 | 0.955 | 8.61 | -- | 0.841 | -1.82 | -- | -- | -0.701 | 20 | 23.9 | 302 | 5 | 5.1 |
| 466.83 | 1.01 | 8.67 | -2.39 | -- | -- | -- | -- | -1.12 | -- | -- | -- | -- | -- |
| 484.87 | 1.03 | 8.65 | -- | 1.51 | -- | -- | -- | -0.849 | 21.3 | -- | -- | -- | -- |
| 427.35 | 0.963 | 8.55 | -- | -- | -2.09 | -- | -- | -0.554 | -- | 23.16 | 323 | 3.12 | 7.36 |
| 617.4 | 1.16 | 8.61 | -- | -- | -- | -- | -- | -0.857 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 276.85 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 4 |
| 8 | 279.70 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 5 |
| 20 | 282.22 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 49 | 284.53 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 4 | 8 |
| 70 | 286.53 | atmosphere | 1015 | 90 | < th | dose dependent | rect. | 6 | 9 |
| 79 | 287.14 | humidity | 80 | 10 | > th | dose dependent | rect. | 21 | 12 |
| 81 | 287.33 | humidity | 80 | 10 | > th | dose dependent | sin | 9 | NA |
| 93 | 287.89 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 109 | 288.42 | temperature | 25 | 10 | > th | dose dependent | sin | 7 | NA |
| 124 | 288.70 | humidity | 80 | 90 | > th | dose independent | rect. | 21 | 9 |
| 150 | 289.66 | atmosphere | 1015 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 152 | 289.67 | humidity | 80 | 10 | > th | dose dependent | rect. | 18 | 15 |
| 153 | 289.68 | humidity | 80 | 10 | > th | dose independent | rect. | 21 | 11 |
| 156 | 289.78 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 178 | 290.11 | temperature | 25 | 10 | > th | dose dependent | rect. | 5 | 5 |
| 183 | 290.14 | humidity | 80 | 10 | > th | dose independent | sin | 9 | NA |
| 186 | 290.16 | humidity | 70 | 270 | > th | dose dependent | rect. | 21 | 8 |
| 202 | 290.46 | temperature | 25 | 10 | > th | dose dependent | rect. | 24 | 10 |
| 222 | 290.73 | atmosphere | 995 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 236 | 290.88 | temperature | 25 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 249 | 290.98 | humidity | 80 | 10 | > th | dose independent | rect. | 23 | 9 |
| 319 | 291.96 | radiation | 1 | 90 | < th | dose independent | sin | 6 | NA |
| 348 | 292.21 | radiation | 1 | 270 | < th | dose independent | sin | 10 | NA |
| 349 | 292.22 | radiation | 10 | 30 | < th | dose dependent | rect. | 9 | 18 |
| 368 | 292.47 | radiation | 1 | 90 | > th | dose independent | sin | 5 | NA |
| 372 | 292.49 | temperature | 25 | 30 | > th | dose independent | rect. | 5 | 7 |
| 383 | 292.68 | radiation | 1 | 270 | < th | dose independent | rect. | 21 | 20 |
| 385 | 292.72 | radiation | 1 | 270 | < th | dose independent | rect. | 21 | 13 |
| 390 | 292.73 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 12 |
| 399 | 292.78 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 12 |
| 411 | 292.93 | temperature | 25 | 10 | > th | dose dependent | rect. | 20 | 14 |
| 454 | 293.21 | radiation | 1 | 270 | > th | dose independent | sin | 9 | NA |
| 477 | 293.37 | humidity | 80 | 10 | < th | dose independent | rect. | 10 | 8 |
| 499 | 293.59 | temperature | 25 | 30 | < th | dose independent | rect. | 3 | 9 |
| 509 | 293.66 | radiation | 1 | 270 | < th | dose dependent | sin | 9 | NA |
| 531 | 293.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 575 | 294.08 | wind | 5 | 270 | < th | dose independent | rect. | 4 | 9 |
| 593 | 294.18 | radiation | 1 | 90 | < th | dose dependent | sin | 5 | NA |
| 607 | 294.26 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 7 | 4 |
| 622 | 294.33 | radiation | 30 | 270 | > th | dose independent | rect. | 7 | 1 |
| 638 | 294.33 | radiation | 1 | 270 | < th | dose dependent | rect. | 21 | 20 |
| 645 | 294.37 | radiation | 1 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 656 | 294.41 | radiation | 10 | 90 | > th | dose independent | sin | 18 | NA |
| 708 | 294.66 | wind | 5 | 270 | < th | dose independent | rect. | 5 | 14 |
| 766 | 294.95 | temperature | 25 | 270 | > th | dose independent | sin | 5 | NA |
| 872 | 295.32 | radiation | 10 | 30 | < th | dose dependent | rect. | 13 | 14 |
| 875 | 295.33 | humidity | 90 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 919 | 295.49 | temperature | 25 | 90 | < th | dose independent | sin | 6 | NA |
| 969 | 295.65 | humidity | 80 | 10 | > th | dose independent | rect. | 18 | 14 |
| 970 | 295.65 | radiation | 10 | 90 | < th | dose independent | rect. | 6 | 21 |
| 981 | 295.71 | humidity | 80 | 270 | > th | dose independent | rect. | 16 | 13 |
| 987 | 295.75 | humidity | 90 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 1000 | 295.78 | radiation | 10 | 90 | < th | dose dependent | rect. | 5 | 22 |