Os01g0214500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0214500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.24 | 0.608 | 8.81 | 0.00734 | 0.268 | 0.263 | 0.287 | 4.19 | -0.00335 | 15.6 | 26.5 | 33 | -- | -- |
| 190.09 | 0.647 | 8.73 | 0.711 | 0.191 | 0.046 | -1.23 | -- | 0.157 | 15 | 26.5 | 33 | -- | -- |
| 167.43 | 0.603 | 8.81 | 0.0439 | 0.266 | 0.269 | -- | 4.03 | -0.000608 | 15.7 | 26.4 | 32 | -- | -- |
| 194.81 | 0.65 | 8.74 | 0.696 | 0.225 | 0.122 | -- | -- | 0.158 | 16.1 | 35 | 13 | -- | -- |
| 170.85 | 0.612 | 8.81 | 0.0267 | -- | 0.0851 | -- | 3.81 | -0.026 | -- | 26.42 | 43 | -- | -- |
| 190.12 | 0.646 | 8.74 | 0.7 | 0.178 | -- | -1.23 | -- | 0.147 | 14.9 | -- | -- | -- | -- |
| 194.95 | 0.654 | 8.74 | 0.673 | 0.195 | -- | -- | -- | 0.141 | 16.4 | -- | -- | -- | -- |
| 189.11 | 0.64 | 8.78 | 0.408 | -- | -0.514 | -- | -- | 0.0509 | -- | 13.32 | 10467 | -- | -- |
| 186.94 | 0.637 | 8.81 | -- | 0.207 | -0.719 | -- | -- | -0.149 | 16.2 | 61.17 | 47520 | -- | -- |
| 196.98 | 0.656 | 8.74 | 0.665 | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
| 206.89 | 0.673 | 8.76 | -- | 0.182 | -- | -- | -- | 0.0658 | 16.5 | -- | -- | -- | -- |
| 187.65 | 0.638 | 8.79 | -- | -- | -0.785 | -- | -- | -0.0741 | -- | 17.92 | 46480 | -- | -- |
| 208.66 | 0.674 | 8.76 | -- | -- | -- | -- | -- | 0.0618 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.07 | temperature | 25.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 4 | 162.31 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 10 | 163.12 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 8 | 12 |
| 12 | 163.30 | temperature | 20.0 | 720 | > th | dose independent | rect. | 22 | 15 |
| 17 | 163.42 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 23 | 13 |
| 21 | 163.50 | temperature | 20.0 | 720 | < th | dose independent | rect. | 22 | 14 |
| 24 | 163.56 | temperature | 20.0 | 720 | > th | dose independent | sin | 6 | NA |
| 57 | 164.07 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 59 | 164.10 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 5 |
| 65 | 164.18 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 91 | 164.48 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 16 |
| 92 | 164.49 | temperature | 20.0 | 720 | < th | dose independent | sin | 6 | NA |
| 96 | 164.52 | temperature | 20.0 | 720 | > th | dose independent | rect. | 2 | 9 |
| 109 | 164.60 | temperature | 25.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 117 | 164.64 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 1 | 6 |
| 140 | 164.78 | temperature | 15.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 156 | 164.98 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 171 | 165.11 | temperature | 20.0 | 90 | > th | dose independent | sin | 22 | NA |
| 177 | 165.14 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 22 | 14 |
| 181 | 165.15 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 2 | 5 |
| 194 | 165.24 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 20 | 16 |
| 269 | 165.62 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 284 | 165.67 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 21 |
| 287 | 165.68 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 21 |
| 288 | 165.68 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 22 |
| 289 | 165.68 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 21 |
| 291 | 165.70 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 21 |
| 294 | 165.73 | temperature | 20.0 | 90 | < th | dose independent | sin | 22 | NA |
| 297 | 165.74 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 299 | 165.74 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 340 | 165.89 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 342 | 165.91 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 387 | 166.12 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 397 | 166.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 406 | 166.22 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 419 | 166.28 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 420 | 166.28 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 16 |
| 422 | 166.28 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 423 | 166.28 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 16 |
| 448 | 166.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 459 | 166.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 16 |
| 467 | 166.45 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 482 | 166.51 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 5 |
| 495 | 166.56 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 554 | 166.75 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 19 |
| 559 | 166.76 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 564 | 166.77 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 570 | 166.77 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 595 | 166.87 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 597 | 166.87 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 13 |
| 606 | 166.89 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 608 | 166.90 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 19 |
| 609 | 166.90 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 19 |
| 636 | 166.95 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 643 | 166.98 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 662 | 167.03 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 23 |
| 681 | 167.07 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 711 | 167.17 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 714 | 167.18 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 8 | 9 |
| 756 | 167.28 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 757 | 167.28 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 765 | 167.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 775 | 167.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 19 |
| 779 | 167.32 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 15 |
| 794 | 167.36 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 22 | 11 |
| 800 | 167.38 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 7 | 3 |
| 837 | 167.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 852 | 167.48 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 881 | 167.57 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 1 | 8 |
| 893 | 167.58 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 7 |
| 898 | 167.59 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 900 | 167.59 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 906 | 167.60 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 18 |
| 909 | 167.61 | temperature | 20.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 912 | 167.62 | temperature | 20.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 928 | 167.66 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 949 | 167.67 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 957 | 167.68 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 0 | NA |
| 966 | 167.70 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 13 |