Os01g0211200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os01g0211200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 178.03 | 0.627 | 5.73 | 1.51 | 0.15 | 3 | 1.53 | 2.06 | 0.827 | 16.1 | 0.9735 | 1462 | -- | -- |
| 180.04 | 0.625 | 5.7 | 1.73 | 0.174 | 2.61 | 1.5 | -- | 0.858 | 16.2 | 0.9399 | 1467 | -- | -- |
| 183.57 | 0.631 | 5.72 | 1.54 | 0.15 | 3.11 | -- | 2.23 | 0.826 | 16.8 | 0.6606 | 1457 | -- | -- |
| 186.28 | 0.636 | 5.69 | 1.78 | 0.165 | 2.63 | -- | -- | 0.868 | 16.6 | 0.8978 | 1464 | -- | -- |
| 184.51 | 0.633 | 5.73 | 1.52 | -- | 3.2 | -- | 2.63 | 0.835 | -- | 0.67 | 1452 | -- | -- |
| 250.71 | 0.742 | 5.77 | 1.12 | 0.0885 | -- | 1.75 | -- | 0.533 | 16.2 | -- | -- | -- | -- |
| 257.24 | 0.751 | 5.77 | 1.14 | 0.219 | -- | -- | -- | 0.543 | 20.1 | -- | -- | -- | -- |
| 187.5 | 0.638 | 5.69 | 1.76 | -- | 2.62 | -- | -- | 0.864 | -- | 0.83 | 1454 | -- | -- |
| 255.05 | 0.744 | 5.76 | -- | 0.155 | 1.77 | -- | -- | 0.601 | 17 | 1.83 | 1478 | -- | -- |
| 259.86 | 0.753 | 5.77 | 1.13 | -- | -- | -- | -- | 0.54 | -- | -- | -- | -- | -- |
| 291.29 | 0.798 | 5.8 | -- | 0.213 | -- | -- | -- | 0.417 | 20.4 | -- | -- | -- | -- |
| 255.86 | 0.745 | 5.75 | -- | -- | 1.75 | -- | -- | 0.6 | -- | 1.83 | 1463 | -- | -- |
| 293.82 | 0.8 | 5.8 | -- | -- | -- | -- | -- | 0.414 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 174.78 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 2 | 175.57 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 13 | NA |
| 6 | 176.78 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 17 | 177.95 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 20 | 178.07 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 24 | 178.15 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 26 | 178.20 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 60 | 179.15 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 67 | 179.25 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 22 |
| 70 | 179.34 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 77 | 179.53 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 85 | 179.80 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 92 | 179.86 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 22 |
| 95 | 179.89 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 97 | 179.90 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 98 | 179.90 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 99 | 179.91 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 21 |
| 109 | 179.92 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 110 | 179.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 116 | 179.95 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 4 | 17 |
| 155 | 180.32 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 177 | 181.34 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 184 | 181.56 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 185 | 181.62 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 202 | 182.27 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 203 | 182.35 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 216 | 182.52 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 220 | 182.58 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 222 | 182.60 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 224 | 182.61 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 228 | 182.64 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 231 | 182.68 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 233 | 182.90 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 11 |
| 234 | 182.91 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 238 | 183.09 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 245 | 183.21 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 11 |
| 250 | 183.30 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 252 | 183.39 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 255 | 183.42 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 6 |
| 266 | 183.47 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 270 | 183.49 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 278 | 183.54 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 12 | 7 |
| 320 | 183.77 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 344 | 183.85 | wind | 7.0 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 348 | 183.87 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 359 | 183.92 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 12 | 7 |
| 482 | 184.45 | wind | 5.0 | 43200 | > th | dose independent | rect. | 10 | 8 |
| 507 | 184.57 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 5 |
| 513 | 184.59 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 518 | 184.61 | wind | 5.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 519 | 184.61 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 5 |
| 521 | 184.61 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 9 |
| 523 | 184.62 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 538 | 184.66 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 555 | 184.72 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 584 | 184.80 | wind | 5.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 599 | 184.83 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 5 |
| 612 | 184.86 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 626 | 184.89 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 634 | 184.91 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 680 | 185.01 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 18 |
| 683 | 185.02 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 13 | 14 |
| 704 | 185.08 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 735 | 185.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 766 | 185.23 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 13 |
| 778 | 185.25 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 807 | 185.31 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 819 | 185.33 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 820 | 185.34 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 960 | 185.65 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 965 | 185.66 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 1000 | 185.71 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |