Os01g0210300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0210300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.05 | 0.456 | 3.05 | -0.13 | 0.153 | 2.13 | -0.563 | 4.23 | -0.0603 | 9.66 | 9.673 | 294 | -- | -- |
| 92.11 | 0.447 | 3.04 | -0.189 | 0.143 | 1.85 | -0.572 | -- | -0.0626 | 9.33 | 10.67 | 262 | -- | -- |
| 92.69 | 0.448 | 3.05 | -0.206 | 0.148 | 2.55 | -- | 3.67 | -0.0776 | 9.93 | 10.67 | 245 | -- | -- |
| 92.85 | 0.449 | 3.04 | -0.209 | 0.139 | 1.82 | -- | -- | -0.0642 | 10.5 | 10.68 | 244 | -- | -- |
| 93.3 | 0.45 | 3.08 | -0.0661 | -- | 6.9 | -- | 22.5 | -0.0709 | -- | 10.67 | 226 | -- | -- |
| 98.5 | 0.465 | 3.04 | -0.246 | 0.148 | -- | -0.434 | -- | -0.082 | 10.9 | -- | -- | -- | -- |
| 99.25 | 0.467 | 3.04 | -0.263 | 0.152 | -- | -- | -- | -0.0826 | 11.7 | -- | -- | -- | -- |
| 93.91 | 0.451 | 3.04 | -0.233 | -- | 1.85 | -- | -- | -0.0702 | -- | 11.23 | 345 | -- | -- |
| 94.04 | 0.452 | 3.03 | -- | 0.146 | 1.93 | -- | -- | -0.0394 | 10.6 | 10.67 | 226 | -- | -- |
| 100.69 | 0.469 | 3.04 | -0.267 | -- | -- | -- | -- | -0.0844 | -- | -- | -- | -- | -- |
| 101.07 | 0.47 | 3.03 | -- | 0.155 | -- | -- | -- | -0.0534 | 11.8 | -- | -- | -- | -- |
| 95.34 | 0.455 | 3.04 | -- | -- | 1.91 | -- | -- | -0.0441 | -- | 11.16 | 329 | -- | -- |
| 102.58 | 0.473 | 3.04 | -- | -- | -- | -- | -- | -0.0548 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.68 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 11 | 86.68 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 64 | 92.37 | wind | 9 | 270 | > th | dose dependent | rect. | 1 | 15 |
| 87 | 92.71 | wind | 9 | 270 | > th | dose independent | rect. | 1 | 15 |
| 106 | 92.91 | wind | 9 | 270 | > th | dose independent | rect. | 19 | 21 |
| 162 | 93.61 | humidity | 70 | 30 | < th | dose dependent | rect. | 19 | 1 |
| 189 | 93.68 | wind | 9 | 270 | > th | dose dependent | sin | 2 | NA |
| 205 | 93.91 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 207 | 93.93 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 221 | 93.95 | wind | 9 | 270 | > th | dose independent | sin | 2 | NA |
| 264 | 94.09 | wind | 9 | 30 | > th | dose independent | rect. | 15 | 5 |
| 268 | 94.13 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 273 | 94.15 | wind | 9 | 270 | > th | dose dependent | rect. | 11 | 15 |
| 282 | 94.16 | wind | 9 | 270 | > th | dose independent | rect. | 11 | 15 |
| 291 | 94.16 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 7 | 1 |
| 294 | 94.18 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 4 | 8 |
| 306 | 94.21 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 320 | 94.23 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 338 | 94.23 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 366 | 94.28 | wind | 1 | 30 | < th | dose independent | rect. | 7 | 1 |
| 368 | 94.28 | wind | 1 | 30 | < th | dose independent | rect. | 7 | 3 |
| 373 | 94.32 | wind | 9 | 90 | > th | dose dependent | rect. | 14 | 6 |
| 380 | 94.34 | humidity | 80 | 30 | < th | dose dependent | rect. | 1 | 5 |
| 384 | 94.35 | wind | 9 | 270 | < th | dose independent | sin | 4 | NA |
| 395 | 94.39 | humidity | 80 | 30 | < th | dose independent | rect. | 1 | 3 |
| 574 | 94.61 | wind | 9 | 270 | < th | dose independent | sin | 0 | NA |
| 623 | 94.66 | humidity | 70 | 30 | < th | dose independent | rect. | 19 | 1 |
| 635 | 94.66 | wind | 9 | 270 | > th | dose dependent | no | NA | NA |
| 718 | 94.69 | humidity | 90 | 30 | < th | dose dependent | rect. | 19 | 11 |
| 829 | 94.82 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 831 | 94.84 | wind | 9 | 270 | > th | dose independent | no | NA | NA |
| 892 | 94.86 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 921 | 94.88 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 16 |
| 940 | 94.88 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 969 | 94.90 | wind | 9 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 971 | 94.91 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 16 |
| 982 | 94.96 | wind | 9 | 270 | < th | dose independent | no | NA | NA |
| 983 | 94.96 | humidity | 70 | 10 | < th | dose independent | rect. | 14 | 6 |
| 998 | 94.98 | humidity | 80 | 270 | < th | dose independent | rect. | 24 | 2 |
| 1000 | 94.98 | wind | 9 | 720 | < th | dose independent | rect. | 6 | 8 |