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Os01g0209800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cationic amino acid transporter (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.9 (0.0356) R2 : 0.648
β1 : 3.43 (0.131) R2dD : 0.553 R2D : 0.351
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.29 (0.0761) R2dN8 : 0.297 R2N8 : 0.0943
σ : 0.669
deviance : 204.92
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
179.86 0.63 12.9 3.29 0.348 1.1 -0.819 1.97 1.34 17 0.2088 646 -- --
180.02 0.625 12.9 3.28 0.367 1.6 -0.807 -- 1.36 17.1 0.1744 651 -- --
180.99 0.627 12.9 3.33 0.361 0.642 -- 3.61 1.34 17.9 0.1934 652 -- --
181.04 0.627 12.9 3.27 0.362 1.57 -- -- 1.35 18.1 0.04865 652 -- --
187.75 0.638 12.9 3.29 -- 1.11 -- 2.04 1.34 -- 0.1502 644 -- --
196.91 0.658 12.9 3.45 0.325 -- -1.02 -- 1.3 16.9 -- -- -- --
197.59 0.658 12.9 3.44 0.374 -- -- -- 1.3 18.8 -- -- -- --
187.83 0.638 12.9 3.25 -- 1.63 -- -- 1.33 -- 0.2266 646 -- --
416.71 0.951 12.9 -- 0.328 2.41 -- -- 1.14 18 -0.4529 2221 -- --
204.92 0.669 12.9 3.43 -- -- -- -- 1.29 -- -- -- -- --
509.2 1.06 13 -- 0.338 -- -- -- 0.914 19.4 -- -- -- --
422.42 0.957 12.9 -- -- 2.4 -- -- 1.13 -- -0.5329 2221 -- --
515.27 1.06 13 -- -- -- -- -- 0.909 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 173.60 humidity 70.0 720 > th dose independent rect. 17 4
2 174.30 humidity 60.0 720 > th dose dependent rect. 17 4
6 175.04 humidity 70.0 720 > th dose independent rect. 17 2
7 175.07 atmosphere 995.0 720 > th dose independent sin 9 NA
14 175.54 humidity 70.0 720 > th dose independent rect. 17 10
15 175.56 atmosphere 995.0 720 > th dose independent rect. 14 7
16 175.60 atmosphere 995.0 720 > th dose independent rect. 9 17
17 175.65 atmosphere 995.0 1440 > th dose independent rect. 11 11
19 175.71 atmosphere 1000.0 270 > th dose independent sin 16 NA
21 175.76 humidity 80.0 720 > th dose independent rect. 19 2
27 176.12 humidity 70.0 1440 > th dose independent rect. 17 15
30 176.28 precipitation 0.1 720 < th dose independent rect. 21 23
31 176.28 precipitation 0.1 720 < th dose dependent rect. 21 23
46 176.45 atmosphere 995.0 720 > th dose independent rect. 9 23
49 176.47 atmosphere 995.0 720 > th dose independent rect. 15 16
55 176.51 precipitation 0.1 720 < th dose independent rect. 3 16
56 176.51 precipitation 0.1 720 < th dose dependent rect. 3 16
67 176.64 temperature 30.0 720 < th dose independent rect. 15 6
69 176.64 atmosphere 995.0 720 > th dose independent rect. 24 23
79 176.76 atmosphere 995.0 1440 > th dose independent rect. 10 9
83 176.81 atmosphere 995.0 720 > th dose independent rect. 11 16
95 177.05 atmosphere 995.0 720 > th dose independent sin 21 NA
101 177.24 atmosphere 995.0 720 > th dose independent rect. 5 17
106 177.33 temperature 30.0 720 < th dose independent rect. 17 16
114 177.41 atmosphere 995.0 720 > th dose independent rect. 1 16
121 177.48 humidity 70.0 1440 < th dose independent rect. 16 2
123 177.49 precipitation 0.1 720 < th dose independent sin 2 NA
124 177.49 atmosphere 995.0 1440 > th dose independent rect. 8 14
125 177.49 precipitation 0.1 720 < th dose dependent sin 2 NA
128 177.53 humidity 70.0 1440 > th dose independent sin 13 NA
129 177.53 atmosphere 995.0 720 > th dose independent sin 12 NA
137 177.57 atmosphere 995.0 720 > th dose independent rect. 22 23
160 177.81 temperature 30.0 720 < th dose independent sin 11 NA
164 177.90 temperature 30.0 720 < th dose independent rect. 15 14
182 178.10 atmosphere 995.0 1440 > th dose independent rect. 8 11
190 178.14 humidity 70.0 1440 < th dose independent rect. 16 15
230 178.28 temperature 30.0 720 < th dose independent rect. 15 12
231 178.28 atmosphere 995.0 720 > th dose independent rect. 1 20
235 178.30 humidity 80.0 1440 < th dose independent rect. 19 1
237 178.30 humidity 80.0 1440 < th dose dependent rect. 19 1
249 178.36 temperature 30.0 720 < th dose independent sin 14 NA
262 178.43 humidity 90.0 1440 < th dose dependent rect. 18 3
274 178.49 temperature 30.0 720 < th dose independent rect. 11 21
279 178.52 atmosphere 995.0 720 > th dose independent rect. 4 23
307 178.76 atmosphere 1000.0 10 > th dose independent sin 15 NA
309 178.77 precipitation 0.1 720 < th dose independent rect. 13 16
311 178.77 precipitation 0.1 720 < th dose dependent rect. 13 16
315 178.79 atmosphere 1000.0 270 < th dose dependent rect. 16 9
357 178.94 precipitation 0.1 720 > th dose dependent rect. 21 22
392 179.07 humidity 50.0 720 > th dose dependent rect. 16 10
395 179.09 temperature 30.0 720 < th dose independent rect. 11 16
438 179.19 temperature 30.0 720 < th dose independent rect. 5 18
441 179.20 humidity 90.0 1440 < th dose dependent rect. 15 6
447 179.22 atmosphere 1000.0 270 < th dose independent rect. 16 7
451 179.24 humidity 50.0 720 > th dose dependent sin 17 NA
453 179.25 atmosphere 995.0 720 > th dose independent rect. 1 18
464 179.30 humidity 70.0 1440 < th dose independent sin 14 NA
496 179.39 humidity 80.0 720 > th dose independent rect. 10 12
505 179.42 atmosphere 995.0 1440 > th dose independent rect. 6 13
517 179.45 precipitation 0.1 720 < th dose independent rect. 12 23
519 179.45 precipitation 0.1 720 < th dose dependent rect. 12 23
534 179.48 atmosphere 1000.0 720 < th dose dependent rect. 10 12
540 179.50 temperature 30.0 720 < th dose independent rect. 11 10
555 179.55 precipitation 0.1 720 > th dose dependent sin 1 NA
556 179.55 precipitation 0.1 43200 > th dose dependent rect. 19 2
557 179.56 humidity 90.0 720 < th dose independent rect. 21 3
626 179.70 wind 7.0 43200 < th dose independent rect. 19 1
636 179.71 precipitation 0.1 43200 > th dose dependent rect. 17 3
648 179.73 precipitation 0.1 720 < th dose independent rect. 5 16
650 179.73 atmosphere 1005.0 270 < th dose dependent rect. 18 2
654 179.73 precipitation 0.1 720 < th dose dependent rect. 5 16
735 179.86 atmosphere 995.0 720 > th dose independent rect. 7 23
762 179.92 temperature 30.0 720 < th dose independent rect. 5 20
775 179.95 temperature 30.0 43200 < th dose independent rect. 2 7
779 179.95 humidity 60.0 720 > th dose dependent rect. 11 11
798 179.99 humidity 90.0 1440 < th dose dependent sin 15 NA
828 180.02 atmosphere 1000.0 10 > th dose independent rect. 12 16
846 180.05 atmosphere 1000.0 90 < th dose dependent rect. 19 6
850 180.06 precipitation 0.1 720 > th dose independent rect. 23 20
853 180.07 precipitation 0.1 720 > th dose independent rect. 4 15
877 180.12 temperature 30.0 43200 < th dose independent rect. 8 1
896 180.16 temperature 30.0 43200 < th dose independent rect. 6 3
921 180.19 humidity 90.0 720 < th dose independent rect. 17 7
936 180.22 temperature 30.0 43200 < th dose independent rect. 23 10
943 180.22 precipitation 0.1 720 > th dose dependent rect. 17 21
945 180.23 atmosphere 1000.0 270 < th dose independent rect. 18 3
964 180.26 atmosphere 1000.0 720 < th dose dependent sin 20 NA
968 180.27 temperature 30.0 720 < th dose independent sin 22 NA
997 180.30 radiation 1.0 720 < th dose dependent rect. 6 21
1000 180.31 temperature 30.0 43200 < th dose independent rect. 21 12