Os01g0209400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ataxin-2, C-terminal domain containing protein.
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Os01g0209400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ataxin-2, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.96 | 0.22 | 9.48 | -0.353 | 0.26 | 0.689 | 0.735 | -1.56 | -0.169 | 11.8 | 18.9 | 10 | -- | -- |
| 23.69 | 0.227 | 9.45 | -0.083 | 0.27 | 0.693 | 0.309 | -- | -0.0926 | 12.1 | 16.36 | 8 | -- | -- |
| 23.55 | 0.226 | 9.46 | -0.19 | 0.271 | 0.664 | -- | -0.707 | -0.124 | 12.4 | 17.72 | 8 | -- | -- |
| 24.05 | 0.228 | 9.45 | -0.073 | 0.282 | 0.706 | -- | -- | -0.0891 | 12.5 | 15.45 | 7 | -- | -- |
| 26.77 | 0.241 | 9.48 | -0.234 | -- | 0.89 | -- | -0.735 | -0.155 | -- | 18.43 | 7 | -- | -- |
| 28.89 | 0.252 | 9.43 | 0.0629 | 0.473 | -- | 0.296 | -- | 0.0143 | 13.2 | -- | -- | -- | -- |
| 29.23 | 0.253 | 9.43 | 0.0737 | 0.474 | -- | -- | -- | 0.0163 | 13.3 | -- | -- | -- | -- |
| 27.38 | 0.244 | 9.46 | -0.125 | -- | 0.9 | -- | -- | -0.132 | -- | 17.56 | 5 | -- | -- |
| 24.15 | 0.229 | 9.45 | -- | 0.286 | 0.662 | -- | -- | -0.0752 | 12.6 | 15.97 | 7 | -- | -- |
| 43.11 | 0.307 | 9.43 | 0.0551 | -- | -- | -- | -- | 0.0064 | -- | -- | -- | -- | -- |
| 29.38 | 0.254 | 9.43 | -- | 0.473 | -- | -- | -- | 0.00809 | 13.3 | -- | -- | -- | -- |
| 27.77 | 0.245 | 9.46 | -- | -- | 0.851 | -- | -- | -0.114 | -- | 18 | 5 | -- | -- |
| 43.19 | 0.307 | 9.43 | -- | -- | -- | -- | -- | 0.000286 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.81 | temperature | 30 | 10 | < th | dose dependent | sin | 4 | NA |
| 7 | 20.33 | temperature | 10 | 10 | > th | dose dependent | sin | 4 | NA |
| 18 | 20.60 | temperature | 25 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 77 | 21.11 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 116 | 21.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 12 |
| 220 | 21.70 | temperature | 25 | 90 | < th | dose independent | sin | 6 | NA |
| 226 | 21.71 | temperature | 25 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 245 | 21.76 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 271 | 21.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 19 |
| 323 | 21.96 | temperature | 20 | 30 | > th | dose dependent | rect. | 17 | 23 |
| 367 | 22.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 375 | 22.10 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 380 | 22.11 | temperature | 20 | 270 | < th | dose independent | rect. | 24 | 15 |
| 394 | 22.14 | temperature | 20 | 270 | > th | dose independent | sin | 4 | NA |
| 436 | 22.25 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 11 |
| 448 | 22.27 | temperature | 25 | 90 | < th | dose independent | rect. | 19 | 22 |
| 500 | 22.38 | temperature | 25 | 90 | < th | dose independent | rect. | 19 | 20 |
| 512 | 22.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 513 | 22.40 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 517 | 22.42 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 523 | 22.44 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 17 |
| 527 | 22.44 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 532 | 22.46 | temperature | 25 | 90 | < th | dose independent | rect. | 17 | 22 |
| 555 | 22.51 | temperature | 25 | 90 | < th | dose independent | rect. | 19 | 18 |
| 577 | 22.54 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 587 | 22.58 | temperature | 25 | 90 | > th | dose independent | rect. | 19 | 23 |
| 593 | 22.59 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 609 | 22.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 6 |
| 622 | 22.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 623 | 22.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 624 | 22.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 631 | 22.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 632 | 22.64 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 660 | 22.68 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 661 | 22.69 | temperature | 25 | 90 | < th | dose independent | rect. | 21 | 20 |
| 672 | 22.72 | temperature | 25 | 90 | < th | dose independent | rect. | 15 | 23 |
| 676 | 22.73 | temperature | 25 | 90 | < th | dose independent | rect. | 21 | 22 |
| 704 | 22.77 | temperature | 25 | 90 | < th | dose independent | rect. | 23 | 23 |
| 709 | 22.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 726 | 22.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 732 | 22.80 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 10 |
| 760 | 22.85 | temperature | 25 | 90 | < th | dose independent | rect. | 13 | 23 |
| 781 | 22.87 | temperature | 25 | 90 | < th | dose independent | no | NA | NA |
| 794 | 22.89 | temperature | 25 | 90 | > th | dose independent | rect. | 5 | 22 |
| 814 | 22.91 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 874 | 22.98 | temperature | 25 | 30 | < th | dose independent | rect. | 3 | 23 |
| 901 | 23.01 | temperature | 25 | 90 | < th | dose independent | rect. | 9 | 23 |
| 923 | 23.04 | temperature | 25 | 90 | > th | dose independent | rect. | 24 | 23 |
| 924 | 23.04 | temperature | 25 | 90 | < th | dose independent | rect. | 7 | 23 |
| 932 | 23.05 | temperature | 20 | 10 | > th | dose independent | sin | 2 | NA |
| 961 | 23.08 | temperature | 25 | 90 | > th | dose independent | no | NA | NA |
| 971 | 23.09 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 2 |