Os01g0209200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to 14-3-3 protein 7.
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Os01g0209200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to 14-3-3 protein 7.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.66 | 0.284 | 10.4 | 0.0922 | 1.37 | 0.498 | -0.338 | -6.64 | 0.266 | 17.6 | 27.5 | 3911 | -- | -- |
| 42.82 | 0.305 | 10.2 | 1.52 | 1.36 | -0.249 | -0.355 | -- | 0.57 | 17.6 | 22.55 | 28678 | -- | -- |
| 36.92 | 0.283 | 10.4 | 0.101 | 1.37 | 0.5 | -- | -6.68 | 0.273 | 17.6 | 27.62 | 3874 | -- | -- |
| 40.87 | 0.298 | 10.3 | 1.42 | 1.36 | -0.279 | -- | -- | 0.381 | 17.6 | 29.63 | 1157 | -- | -- |
| 130.74 | 0.533 | 10.4 | -0.439 | -- | 0.578 | -- | -8.25 | 0.143 | -- | 27.94 | 2710 | -- | -- |
| 43.92 | 0.311 | 10.2 | 1.33 | 1.4 | -- | -0.307 | -- | 0.462 | 17.6 | -- | -- | -- | -- |
| 44.15 | 0.311 | 10.2 | 1.33 | 1.4 | -- | -- | -- | 0.461 | 17.6 | -- | -- | -- | -- |
| 132.94 | 0.539 | 10.2 | 1.2 | -- | 0.905 | -- | -- | 0.441 | -- | 27.94 | 2710 | -- | -- |
| 90.38 | 0.445 | 10.3 | -- | 1.35 | 0.193 | -- | -- | 0.321 | 17.7 | 29.63 | 1157 | -- | -- |
| 145.37 | 0.563 | 10.2 | 1.28 | -- | -- | -- | -- | 0.428 | -- | -- | -- | -- | -- |
| 90.71 | 0.446 | 10.3 | -- | 1.37 | -- | -- | -- | 0.313 | 17.6 | -- | -- | -- | -- |
| 159.07 | 0.589 | 10.3 | -- | -- | 1.4 | -- | -- | 0.126 | -- | 6.654 | 47520 | -- | -- |
| 188.86 | 0.641 | 10.2 | -- | -- | -- | -- | -- | 0.285 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.97 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 2 | 35.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 2 |
| 3 | 35.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 4 | 36.33 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 6 | 36.44 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 7 | 36.47 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 8 | 36.47 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 10 | 36.50 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 22 | 6 |
| 11 | 36.53 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 14 | 36.54 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 15 | 36.54 | wind | 7.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 18 | 36.58 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 20 | 36.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 22 | 36.61 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 23 | 36.61 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 26 | 36.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 27 | 36.61 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 29 | 36.61 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 32 | 36.61 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 34 | 36.62 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 40 | 36.64 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 45 | 36.70 | wind | 7.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 46 | 36.70 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 47 | 36.71 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 51 | 36.77 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 12 | 3 |
| 54 | 36.77 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 22 | 6 |
| 56 | 36.78 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 4 |
| 58 | 36.78 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 62 | 36.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 20 |
| 66 | 36.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 72 | 36.87 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 74 | 36.87 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 83 | 36.91 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 5 |
| 85 | 36.91 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 90 | 36.95 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 96 | 36.97 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 18 | 22 |
| 99 | 36.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 101 | 36.99 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 102 | 36.99 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 104 | 36.99 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 105 | 36.99 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 107 | 36.99 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 128 | 37.02 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 7 | 9 |
| 140 | 37.03 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 20 | 20 |
| 151 | 37.05 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 173 | 37.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 190 | 37.13 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 12 |
| 200 | 37.14 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 11 | 21 |
| 203 | 37.15 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 220 | 37.16 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 251 | 37.18 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 21 | 5 |
| 258 | 37.19 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 18 | 22 |
| 274 | 37.21 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 4 |
| 279 | 37.21 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 19 |
| 280 | 37.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 281 | 37.21 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 282 | 37.22 | temperature | 30.0 | 4320 | < th | dose independent | sin | 22 | NA |
| 364 | 37.26 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 22 |
| 368 | 37.26 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 404 | 37.29 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 5 | 16 |
| 484 | 37.30 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 7 | 23 |
| 489 | 37.30 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 490 | 37.31 | temperature | 30.0 | 4320 | < th | dose independent | no | NA | NA |
| 640 | 37.40 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 660 | 37.42 | temperature | 30.0 | 4320 | > th | dose independent | sin | 21 | NA |
| 666 | 37.43 | temperature | 30.0 | 4320 | > th | dose independent | sin | 19 | NA |
| 671 | 37.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 20 |
| 674 | 37.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 20 |
| 711 | 37.47 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 759 | 37.51 | temperature | 30.0 | 4320 | > th | dose independent | no | NA | NA |
| 865 | 37.52 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 866 | 37.52 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 4 |
| 868 | 37.52 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 6 |
| 880 | 37.54 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 884 | 37.55 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 922 | 37.59 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 927 | 37.59 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 929 | 37.59 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 934 | 37.60 | humidity | 80.0 | 270 | > th | dose independent | rect. | 22 | 3 |