Os01g0207500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0207500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.33 | 0.53 | 3.17 | -0.79 | 0.0764 | -0.571 | -1.72 | 1.43 | -0.118 | 18.6 | 20.2 | 2911 | -- | -- |
| 131.31 | 0.534 | 3.23 | -0.981 | 0.0695 | -0.662 | -1.85 | -- | -0.196 | 18.4 | 20.09 | 5679 | -- | -- |
| 132.89 | 0.537 | 3.15 | -0.665 | 0.196 | -0.601 | -- | 1.54 | -0.0611 | 23.2 | 20.5 | 2818 | -- | -- |
| 137.85 | 0.547 | 3.2 | -0.837 | 0.176 | -0.885 | -- | -- | -0.0559 | 22.5 | 20.39 | 5687 | -- | -- |
| 135.02 | 0.541 | 3.16 | -0.713 | -- | -0.602 | -- | 1.57 | -0.0891 | -- | 20.1 | 2882 | -- | -- |
| 143.48 | 0.562 | 3.27 | -1.48 | 0.0941 | -- | -1.9 | -- | -0.382 | 18.5 | -- | -- | -- | -- |
| 150.98 | 0.575 | 3.27 | -1.45 | 0.178 | -- | -- | -- | -0.39 | 22.7 | -- | -- | -- | -- |
| 139.26 | 0.55 | 3.2 | -0.908 | -- | -0.843 | -- | -- | -0.107 | -- | 20 | 5684 | -- | -- |
| 140.6 | 0.552 | 3.18 | -- | 0.222 | -1.48 | -- | -- | 0.109 | 21.5 | 18.5 | 14162 | -- | -- |
| 152.94 | 0.578 | 3.27 | -1.45 | -- | -- | -- | -- | -0.389 | -- | -- | -- | -- | -- |
| 206.75 | 0.673 | 3.24 | -- | 0.169 | -- | -- | -- | -0.228 | 22.1 | -- | -- | -- | -- |
| 141.79 | 0.555 | 3.17 | -- | -- | -1.51 | -- | -- | 0.0448 | -- | 17.97 | 14171 | -- | -- |
| 208.48 | 0.674 | 3.23 | -- | -- | -- | -- | -- | -0.228 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 122.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 3 | 122.77 | wind | 3.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 4 | 122.80 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 5 | 122.83 | wind | 3.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 7 | 122.85 | wind | 3.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 12 | 122.92 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 24 | 123.41 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 7 | 4 |
| 34 | 123.56 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 61 | 124.04 | wind | 3.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 62 | 124.04 | wind | 3.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 93 | 124.27 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 16 |
| 94 | 124.27 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 16 |
| 97 | 124.30 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 126 | 124.44 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 132 | 124.46 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 212 | 124.82 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 215 | 124.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 226 | 124.86 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 233 | 124.89 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 13 |
| 254 | 124.96 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 11 |
| 282 | 125.06 | wind | 1.0 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 297 | 125.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 312 | 125.13 | wind | 5.0 | 14400 | < th | dose dependent | sin | 4 | NA |
| 327 | 125.15 | wind | 1.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 396 | 125.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 475 | 125.39 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 539 | 125.49 | wind | 3.0 | 14400 | < th | dose independent | no | NA | NA |
| 544 | 125.50 | wind | 3.0 | 14400 | > th | dose independent | no | NA | NA |
| 549 | 125.50 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 556 | 125.53 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 573 | 125.56 | wind | 3.0 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 583 | 125.57 | wind | 3.0 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 607 | 125.62 | wind | 3.0 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 613 | 125.63 | wind | 3.0 | 14400 | > th | dose independent | rect. | 8 | 23 |
| 641 | 125.68 | wind | 1.0 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 721 | 125.80 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 726 | 125.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 733 | 125.81 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 22 |
| 882 | 125.98 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 898 | 126.00 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 16 |
| 951 | 126.06 | wind | 1.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 971 | 126.08 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 19 | 16 |
| 981 | 126.09 | wind | 3.0 | 14400 | < th | dose dependent | no | NA | NA |
| 982 | 126.09 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 13 |