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Os01g0206700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Serine/threonine protein kinase (CBL-interacting protein kinase 20).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0453) R2 : 0.79
β1 : -1.63 (0.165) R2dD : 0.0446 R2D : 0.0346
β2 : 5.54 (0.151) R2dC : 1.02 R2C : 0.668
β3 : 1.6 (0.162) R2dE : 0.0753 R2E : -0.272
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0505 (0.0964) R2dN8 : 0.000128 R2N8 : -0.00456
σ : 0.845
deviance : 328.91
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_____
C
peak time of C : 6.53
E
wheather : radiation
threshold : 2.644
memory length : 80
response mode : < th
dose dependency : dose independent
G
type of G : sin
peak or start time of G : 12.9
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
319.75 0.84 11.7 -1.53 5.55 1.57 -0.0769 -2.13 0.0408 6.61 0.8545 30 12.1 --
324.14 0.839 11.7 -1.68 5.6 1.52 1.62 -- 0.108 6.56 2.64 73 12.5 --
319.76 0.833 11.7 -1.53 5.55 1.57 -- -2.08 0.0406 6.61 0.8599 30 12.1 --
328.91 0.845 11.7 -1.63 5.54 1.6 -- -- 0.0505 6.53 2.644 80 12.9 --
483.83 1.02 11.7 -1.69 -- 3.79 -- 0.267 -0.00405 -- 0.606 557 1.89 --
365.54 0.896 11.7 -1.65 4.66 -- 1.39 -- 0.0317 5.97 -- -- -- --
370.23 0.901 11.8 -1.64 4.67 -- -- -- 0.026 5.95 -- -- -- --
367.37 0.893 11.9 -1.61 -- 4.96 -- -- 0.045 -- 3.43 627 4.41 --
397.34 0.928 11.7 -- 5.51 1.6 -- -- 0.125 6.51 2.54 86 13 --
1501.26 1.81 11.8 -1.5 -- -- -- -- 0.133 -- -- -- -- --
441.13 0.982 11.7 -- 4.65 -- -- -- 0.209 5.97 -- -- -- --
418.66 0.953 11.8 -- -- 5.01 -- -- 0.314 -- 11.17 597 4.58 --
1560.74 1.84 11.8 -- -- -- -- -- 0.3 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 319.96 radiation 1.0 30 < th dose independent sin 18 NA
2 320.15 radiation 1.0 10 > th dose independent sin 17 NA
16 321.94 radiation 1.0 10 < th dose dependent sin 18 NA
21 322.36 humidity 90.0 720 > th dose dependent rect. 18 6
44 325.09 temperature 10.0 270 > th dose dependent rect. 11 14
60 326.23 temperature 10.0 90 > th dose dependent rect. 13 14
61 326.35 precipitation 0.1 720 < th dose independent rect. 17 18
62 326.35 precipitation 0.1 720 < th dose dependent rect. 17 18
67 326.76 humidity 90.0 720 < th dose dependent rect. 19 1
68 326.76 humidity 90.0 720 > th dose dependent rect. 10 15
70 326.96 radiation 1.0 90 < th dose independent rect. 11 12
73 327.05 temperature 10.0 10 > th dose dependent rect. 12 15
75 327.11 radiation 1.0 10 < th dose dependent rect. 4 20
81 327.30 radiation 1.0 10 < th dose independent rect. 11 11
85 327.31 precipitation 0.1 720 < th dose independent rect. 8 21
86 327.31 precipitation 0.1 720 < th dose dependent rect. 8 21
99 327.67 humidity 90.0 720 > th dose dependent rect. 14 11
102 327.71 radiation 1.0 90 < th dose independent rect. 16 7
107 327.87 humidity 90.0 720 > th dose independent rect. 20 4
128 328.42 radiation 1.0 10 < th dose dependent rect. 11 11
132 328.44 humidity 80.0 720 < th dose independent rect. 18 2
138 328.49 radiation 1.0 10 < th dose independent rect. 4 20
142 328.60 precipitation 0.1 720 < th dose independent rect. 16 13
143 328.60 temperature 10.0 10 > th dose dependent rect. 14 13
144 328.60 precipitation 0.1 720 < th dose dependent rect. 16 13
153 328.85 precipitation 0.1 720 < th dose independent rect. 2 18
154 328.85 precipitation 0.1 720 < th dose dependent rect. 2 18
156 328.94 radiation 1.0 270 < th dose independent rect. 15 5
169 329.08 radiation 20.0 270 < th dose dependent rect. 15 6
175 329.22 humidity 70.0 720 > th dose dependent rect. 19 4
178 329.23 radiation 1.0 10 < th dose dependent rect. 13 9
189 329.32 humidity 50.0 720 > th dose dependent rect. 19 6
202 329.51 radiation 1.0 10 < th dose dependent rect. 16 6
249 330.22 radiation 1.0 10 > th dose independent rect. 14 5
267 330.29 radiation 1.0 90 > th dose independent rect. 11 8
302 330.68 precipitation 0.1 720 < th dose independent rect. 17 3
303 330.68 precipitation 0.1 720 < th dose dependent rect. 17 3
314 330.79 precipitation 0.1 720 < th dose independent rect. 17 20
315 330.79 precipitation 0.1 720 < th dose dependent rect. 17 20
335 331.05 precipitation 0.1 720 < th dose independent rect. 23 23
337 331.05 precipitation 0.1 720 < th dose dependent rect. 23 23
338 331.06 precipitation 0.1 720 < th dose independent rect. 10 10
339 331.06 precipitation 0.1 720 < th dose dependent rect. 10 10
340 331.08 radiation 20.0 270 < th dose independent rect. 15 6
341 331.12 temperature 30.0 90 < th dose independent rect. 17 6
379 331.41 humidity 60.0 90 > th dose independent rect. 17 6
385 331.47 humidity 90.0 720 > th dose dependent sin 18 NA
387 331.48 radiation 1.0 10 < th dose dependent rect. 4 18
389 331.53 atmosphere 1005.0 10 > th dose independent rect. 17 18
392 331.56 radiation 40.0 270 < th dose dependent rect. 10 11
404 331.67 radiation 40.0 270 < th dose independent sin 13 NA
429 331.94 radiation 1.0 90 > th dose dependent sin 15 NA
438 332.02 temperature 25.0 30 > th dose independent rect. 14 4
442 332.12 wind 1.0 90 < th dose independent rect. 24 1
452 332.18 precipitation 0.1 720 < th dose independent rect. 8 14
455 332.18 precipitation 0.1 720 < th dose dependent rect. 8 14
462 332.27 radiation 40.0 270 > th dose independent sin 13 NA
467 332.31 radiation 30.0 270 < th dose independent sin 17 NA
483 332.47 radiation 1.0 270 > th dose dependent rect. 11 22
528 332.79 radiation 40.0 270 > th dose independent rect. 14 19
532 332.81 radiation 40.0 270 > th dose independent sin 16 NA
560 333.05 precipitation 0.1 720 < th dose independent rect. 2 9
561 333.05 precipitation 0.1 720 < th dose dependent rect. 2 9
563 333.09 radiation 30.0 270 > th dose independent sin 18 NA
580 333.20 radiation 1.0 10 < th dose independent rect. 4 18
584 333.24 humidity 50.0 270 > th dose independent rect. 17 3
591 333.29 radiation 40.0 270 < th dose independent rect. 8 13
597 333.32 radiation 30.0 270 > th dose independent rect. 11 22
603 333.36 wind 1.0 90 > th dose independent sin 18 NA
620 333.44 precipitation 0.1 720 < th dose independent rect. 23 15
624 333.44 precipitation 0.1 720 < th dose dependent rect. 23 15
652 333.60 radiation 40.0 10 < th dose dependent rect. 18 20
659 333.65 radiation 30.0 270 > th dose dependent sin 13 NA
666 333.72 precipitation 0.1 720 < th dose independent rect. 10 18
667 333.72 precipitation 0.1 720 < th dose dependent rect. 10 18
678 333.83 radiation 30.0 270 > th dose independent rect. 11 5
700 333.87 radiation 30.0 270 > th dose dependent sin 16 NA
701 333.88 wind 1.0 270 > th dose independent rect. 17 3
702 333.88 precipitation 0.1 270 < th dose independent rect. 16 5
704 333.88 precipitation 0.1 270 < th dose dependent rect. 16 5
705 333.91 precipitation 0.1 270 < th dose independent rect. 1 11
709 333.91 precipitation 0.1 270 < th dose dependent rect. 1 11
710 333.92 radiation 1.0 10 > th dose independent rect. 12 7
725 333.93 temperature 20.0 270 > th dose dependent rect. 12 3
752 334.12 temperature 10.0 270 > th dose independent rect. 17 3
753 334.12 atmosphere 1015.0 270 < th dose independent rect. 17 3
757 334.12 temperature 10.0 270 > th dose independent rect. 20 21
762 334.16 wind 1.0 90 < th dose independent rect. 13 13
775 334.27 temperature 30.0 90 < th dose independent rect. 17 18
783 334.33 radiation 1.0 270 > th dose dependent rect. 11 5
796 334.43 temperature 20.0 30 > th dose independent rect. 12 15
823 334.52 wind 9.0 270 < th dose independent rect. 17 3
842 334.59 precipitation 0.1 720 > th dose independent rect. 14 14
843 334.59 wind 9.0 270 < th dose independent rect. 20 21
853 334.64 temperature 30.0 90 < th dose dependent rect. 17 6
855 334.65 humidity 90.0 720 < th dose independent rect. 17 7
897 334.80 wind 1.0 270 > th dose independent rect. 16 5
912 334.85 temperature 10.0 270 > th dose independent rect. 16 5
914 334.85 temperature 10.0 270 > th dose independent rect. 21 19
916 334.86 temperature 20.0 270 > th dose dependent rect. 11 5
917 334.87 atmosphere 995.0 270 > th dose independent rect. 17 3
923 334.90 wind 1.0 90 < th dose dependent rect. 24 1
925 334.91 radiation 1.0 43200 < th dose dependent rect. 19 4
926 334.91 temperature 10.0 270 > th dose dependent rect. 1 10
947 335.04 radiation 30.0 270 < th dose independent rect. 13 9
956 335.09 radiation 40.0 270 < th dose dependent rect. 15 20
962 335.14 wind 9.0 270 < th dose independent rect. 21 19
971 335.20 precipitation 0.1 720 > th dose independent rect. 17 11
1000 335.28 radiation 30.0 270 < th dose independent rect. 10 11