Os01g0206200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0206200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.55 | 0.383 | 10.3 | 2.93 | 1.63 | -0.819 | -0.631 | -0.134 | 0.481 | 18.8 | 20.4 | 5750 | -- | -- |
| 66.54 | 0.38 | 10.3 | 2.91 | 1.63 | -0.793 | -0.661 | -- | 0.472 | 18.8 | 20.5 | 5776 | -- | -- |
| 67.53 | 0.383 | 10.3 | 2.94 | 1.63 | -0.798 | -- | -0.0944 | 0.479 | 18.7 | 20.5 | 5774 | -- | -- |
| 67.54 | 0.383 | 10.3 | 2.93 | 1.63 | -0.783 | -- | -- | 0.473 | 18.7 | 20.56 | 5776 | -- | -- |
| 205.2 | 0.667 | 10.3 | 2.78 | -- | -0.74 | -- | 0.227 | 0.428 | -- | 19.4 | 13693 | -- | -- |
| 78.33 | 0.415 | 10.3 | 3.46 | 1.62 | -- | -0.557 | -- | 0.722 | 18.8 | -- | -- | -- | -- |
| 79.12 | 0.417 | 10.3 | 3.47 | 1.62 | -- | -- | -- | 0.721 | 18.8 | -- | -- | -- | -- |
| 204.7 | 0.666 | 10.3 | 2.59 | -- | -0.98 | -- | -- | 0.364 | -- | 19.3 | 15067 | -- | -- |
| 97.77 | 0.461 | 10.5 | -- | 1.62 | -2.74 | -- | -- | -0.319 | 18.7 | 18.4 | 47520 | -- | -- |
| 216.53 | 0.688 | 10.2 | 3.43 | -- | -- | -- | -- | 0.689 | -- | -- | -- | -- | -- |
| 395.7 | 0.931 | 10.3 | -- | 1.58 | -- | -- | -- | 0.335 | 18.9 | -- | -- | -- | -- |
| 235.05 | 0.714 | 10.5 | -- | -- | -2.69 | -- | -- | -0.346 | -- | 18.52 | 47520 | -- | -- |
| 526.77 | 1.07 | 10.3 | -- | -- | -- | -- | -- | 0.309 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.80 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 3 | 60.49 | wind | 1.0 | 43200 | < th | dose independent | rect. | 16 | 12 |
| 4 | 60.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 21 | 7 |
| 5 | 61.01 | wind | 1.0 | 43200 | > th | dose independent | rect. | 17 | 11 |
| 8 | 61.23 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 12 |
| 9 | 61.27 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 4 |
| 13 | 61.31 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 6 |
| 14 | 61.37 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 5 |
| 15 | 61.40 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 18 | 61.44 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 19 | 61.47 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 24 | 61.52 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 37 | 61.90 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 51 | 62.10 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 52 | 62.11 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 53 | 62.19 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 65 | 62.39 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 73 | 62.49 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 74 | 62.50 | wind | 1.0 | 43200 | < th | dose dependent | sin | 15 | NA |
| 85 | 62.63 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 101 | 62.84 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 104 | 62.90 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 108 | 62.95 | wind | 1.0 | 43200 | > th | dose independent | sin | 14 | NA |
| 126 | 63.12 | wind | 1.0 | 43200 | < th | dose independent | sin | 14 | NA |
| 129 | 63.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 131 | 63.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 132 | 63.14 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 157 | 63.27 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 167 | 63.35 | wind | 1.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 171 | 63.37 | wind | 1.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 172 | 63.37 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 193 | 63.54 | wind | 1.0 | 14400 | < th | dose dependent | sin | 11 | NA |
| 199 | 63.57 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 202 | 63.61 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 228 | 63.74 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 11 |
| 231 | 63.78 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 233 | 63.81 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 246 | 63.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 247 | 63.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 254 | 63.90 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 17 | 17 |
| 269 | 63.96 | wind | 1.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 271 | 63.97 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 281 | 64.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 283 | 64.01 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 284 | 64.01 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 287 | 64.01 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 288 | 64.01 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 289 | 64.01 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 292 | 64.01 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 299 | 64.02 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 301 | 64.04 | wind | 5.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 318 | 64.12 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 323 | 64.13 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 336 | 64.17 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 338 | 64.17 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 340 | 64.18 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 349 | 64.21 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 6 |
| 366 | 64.26 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 373 | 64.29 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 4 | 1 |
| 434 | 64.48 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 450 | 64.54 | temperature | 25.0 | 90 | < th | dose independent | rect. | 4 | 18 |
| 471 | 64.60 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 529 | 64.76 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 536 | 64.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 539 | 64.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 544 | 64.78 | radiation | 1.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 561 | 64.83 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 572 | 64.88 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 576 | 64.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 578 | 64.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 579 | 64.89 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 581 | 64.89 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 582 | 64.89 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 583 | 64.89 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 584 | 64.89 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 587 | 64.89 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 590 | 64.90 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 597 | 64.91 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 1 | 4 |
| 601 | 64.92 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 1 | 4 |
| 618 | 64.96 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 620 | 64.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 622 | 64.96 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 629 | 64.98 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |
| 635 | 64.99 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 638 | 65.00 | temperature | 25.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 687 | 65.12 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 21 |
| 694 | 65.14 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 698 | 65.14 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 720 | 65.18 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 721 | 65.18 | humidity | 70.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 738 | 65.22 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 739 | 65.22 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 741 | 65.22 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 9 |
| 755 | 65.25 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 785 | 65.28 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 24 | 17 |
| 817 | 65.33 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 824 | 65.34 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 831 | 65.34 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 846 | 65.35 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 881 | 65.37 | humidity | 60.0 | 43200 | < th | dose dependent | sin | 1 | NA |
| 889 | 65.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 899 | 65.38 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 910 | 65.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 22 |
| 938 | 65.41 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 958 | 65.42 | humidity | 60.0 | 43200 | < th | dose dependent | no | NA | NA |
| 960 | 65.42 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 2 |
| 969 | 65.42 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 971 | 65.42 | humidity | 60.0 | 43200 | < th | dose dependent | rect. | 6 | 23 |