Os01g0201100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 14 protein.
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Os01g0201100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 14 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 266.99 | 0.768 | 4.59 | 0.583 | 0.993 | 0.778 | 1.73 | -1.53 | 0.298 | 19.4 | 20.2 | 934 | -- | -- |
| 271.3 | 0.767 | 4.55 | 0.776 | 1 | 1.12 | 1.6 | -- | 0.34 | 19.3 | 19.8 | 1080 | -- | -- |
| 273.85 | 0.771 | 4.58 | 0.59 | 1.01 | 0.84 | -- | -1.19 | 0.306 | 19.7 | 20.21 | 1063 | -- | -- |
| 276.74 | 0.775 | 4.55 | 0.729 | 1.04 | 1.13 | -- | -- | 0.337 | 19.8 | 19.9 | 1242 | -- | -- |
| 324.75 | 0.839 | 4.54 | 0.588 | -- | 1.11 | -- | -0.719 | 0.295 | -- | 20.1 | 784 | -- | -- |
| 297.3 | 0.808 | 4.5 | 1.22 | 1.06 | -- | 1.35 | -- | 0.562 | 19.7 | -- | -- | -- | -- |
| 301.94 | 0.814 | 4.5 | 1.18 | 1.05 | -- | -- | -- | 0.562 | 20.1 | -- | -- | -- | -- |
| 325.06 | 0.84 | 4.54 | 0.723 | -- | 1.22 | -- | -- | 0.304 | -- | 19.8 | 706 | -- | -- |
| 286.98 | 0.789 | 4.58 | -- | 1 | 1.32 | -- | -- | 0.273 | 19.9 | 19.91 | 2624 | -- | -- |
| 362.95 | 0.89 | 4.48 | 1.17 | -- | -- | -- | -- | 0.549 | -- | -- | -- | -- | -- |
| 338.68 | 0.861 | 4.53 | -- | 1.05 | -- | -- | -- | 0.43 | 20.2 | -- | -- | -- | -- |
| 337.21 | 0.855 | 4.55 | -- | -- | 1.45 | -- | -- | 0.224 | -- | 19.8 | 704 | -- | -- |
| 399.14 | 0.933 | 4.5 | -- | -- | -- | -- | -- | 0.419 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 262.20 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 18 |
| 5 | 262.72 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 16 |
| 6 | 263.02 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 12 |
| 9 | 263.52 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 14 |
| 18 | 264.37 | temperature | 20 | 720 | > th | dose independent | sin | 17 | NA |
| 26 | 264.86 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 18 |
| 33 | 264.95 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 20 |
| 35 | 264.99 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 10 |
| 36 | 265.05 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 21 |
| 53 | 265.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 6 |
| 62 | 265.69 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 7 |
| 73 | 265.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 95 | 266.16 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 179 | 267.37 | temperature | 20 | 1440 | < th | dose independent | sin | 17 | NA |
| 187 | 267.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 352 | 269.06 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 21 |
| 365 | 269.19 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 384 | 269.42 | temperature | 20 | 720 | > th | dose independent | sin | 22 | NA |
| 397 | 269.60 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 408 | 269.65 | temperature | 20 | 720 | < th | dose independent | rect. | 9 | 23 |
| 410 | 269.67 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 23 |
| 419 | 269.73 | temperature | 20 | 720 | < th | dose independent | rect. | 15 | 23 |
| 421 | 269.75 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 423 | 269.76 | temperature | 20 | 720 | < th | dose independent | rect. | 13 | 23 |
| 453 | 269.91 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 470 | 269.99 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 23 |
| 499 | 270.11 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 23 |
| 545 | 270.43 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 16 | 6 |
| 626 | 270.84 | humidity | 80 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 736 | 271.06 | humidity | 80 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 805 | 271.30 | temperature | 20 | 30 | > th | dose independent | rect. | 21 | 12 |
| 827 | 271.40 | temperature | 20 | 30 | > th | dose independent | rect. | 23 | 10 |
| 872 | 271.61 | temperature | 20 | 1440 | < th | dose dependent | rect. | 20 | 4 |
| 906 | 271.77 | humidity | 80 | 43200 | < th | dose independent | sin | 14 | NA |
| 918 | 271.83 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 11 |
| 959 | 271.99 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 16 | 1 |
| 997 | 272.17 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 19 | 2 |