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Os01g0201000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.6 (0.0142) R2 : 0.0299
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.112 (0.0299) R2dN8 : 0.0386 R2N8 : 0.0299
σ : 0.267
deviance : 32.82
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
19.16 0.206 10.6 0.511 0.101 0.409 -0.0603 -0.00156 -0.0488 16.6 3.303 10 -- --
19.16 0.204 10.6 0.511 0.101 0.407 -0.061 -- -0.0486 16.5 3.599 9 -- --
19.17 0.204 10.6 0.511 0.1 0.408 -- -0.0187 -0.0489 16.5 3.491 9 -- --
19.17 0.204 10.6 0.511 0.101 0.409 -- -- -0.049 16.5 3.57 9 -- --
19.64 0.206 10.6 0.51 -- 0.45 -- -0.00918 -0.0506 -- 3.07 9 -- --
21.63 0.218 10.6 0.515 0.272 -- -0.0322 -- -0.0502 13.5 -- -- -- --
21.64 0.218 10.6 0.514 0.272 -- -- -- -0.0503 13.5 -- -- -- --
19.64 0.206 10.6 0.507 -- 0.451 -- -- -0.0514 -- 3.08 9 -- --
26.04 0.238 10.6 -- 0.0899 0.413 -- -- -0.106 16.7 3.851 9 -- --
26.15 0.239 10.6 0.503 -- -- -- -- -0.0562 -- -- -- -- --
28.59 0.25 10.6 -- 0.262 -- -- -- -0.108 13.5 -- -- -- --
26.44 0.239 10.6 -- -- 0.447 -- -- -0.108 -- 3.31 9 -- --
32.82 0.267 10.6 -- -- -- -- -- -0.112 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.82 radiation 1.0 10 > th dose dependent rect. 8 4
2 16.91 temperature 15.0 270 > th dose independent rect. 6 6
3 16.96 humidity 50.0 270 > th dose independent rect. 12 18
4 17.00 radiation 1.0 270 > th dose independent rect. 6 6
6 17.04 precipitation 0.1 270 < th dose independent rect. 6 6
7 17.04 wind 7.0 270 < th dose independent rect. 17 8
8 17.04 precipitation 0.1 270 < th dose dependent rect. 6 6
10 17.07 wind 9.0 270 < th dose independent rect. 6 6
12 17.07 atmosphere 995.0 270 > th dose independent rect. 6 6
13 17.07 atmosphere 1015.0 270 < th dose independent rect. 6 6
14 17.07 temperature 10.0 270 > th dose independent rect. 12 18
16 17.14 wind 9.0 270 < th dose independent rect. 12 18
18 17.15 humidity 50.0 270 > th dose independent rect. 6 6
19 17.16 humidity 50.0 270 > th dose independent rect. 1 15
27 17.21 precipitation 0.1 270 < th dose independent rect. 17 8
37 17.21 precipitation 0.1 270 < th dose dependent rect. 17 8
50 17.32 precipitation 0.1 270 < th dose independent rect. 12 18
63 17.32 precipitation 0.1 270 < th dose dependent rect. 12 18
64 17.33 atmosphere 995.0 270 > th dose independent rect. 17 8
65 17.33 precipitation 0.1 270 < th dose independent rect. 7 16
66 17.33 precipitation 0.1 270 < th dose dependent rect. 7 16
71 17.35 radiation 10.0 270 < th dose independent rect. 17 8
73 17.36 temperature 10.0 270 > th dose independent rect. 17 8
77 17.36 radiation 10.0 270 < th dose independent rect. 23 8
78 17.36 temperature 10.0 270 > th dose independent rect. 1 16
79 17.36 atmosphere 1015.0 270 < th dose independent rect. 1 16
82 17.38 wind 9.0 270 < th dose independent rect. 1 16
83 17.41 radiation 1.0 270 > th dose independent rect. 7 4
84 17.41 radiation 40.0 270 < th dose dependent rect. 17 8
93 17.44 humidity 90.0 30 < th dose independent rect. 8 4
94 17.44 humidity 90.0 10 < th dose independent rect. 8 6
95 17.45 humidity 50.0 270 > th dose independent rect. 17 8
103 17.47 precipitation 0.1 270 < th dose independent rect. 1 16
106 17.47 precipitation 0.1 270 < th dose dependent rect. 1 16
109 17.48 wind 1.0 270 > th dose independent rect. 17 8
114 17.48 wind 7.0 270 < th dose independent rect. 18 17
116 17.48 radiation 30.0 270 < th dose dependent rect. 23 8
119 17.49 humidity 50.0 270 > th dose independent rect. 12 6
122 17.50 humidity 90.0 10 < th dose dependent rect. 8 6
126 17.51 wind 9.0 10 < th dose independent rect. 20 16
127 17.51 atmosphere 995.0 270 > th dose independent rect. 12 18
132 17.52 humidity 50.0 30 > th dose independent rect. 12 20
158 17.54 humidity 70.0 270 > th dose independent rect. 23 8
172 17.57 wind 9.0 270 < th dose dependent rect. 17 8
176 17.58 radiation 10.0 270 < th dose independent rect. 1 6
177 17.58 wind 9.0 10 < th dose independent rect. 12 8
182 17.59 temperature 15.0 270 > th dose independent rect. 23 8
186 17.60 wind 9.0 270 < th dose independent rect. 23 8
188 17.60 temperature 30.0 270 < th dose independent rect. 23 8
189 17.60 humidity 50.0 270 > th dose independent rect. 23 8
191 17.60 atmosphere 995.0 270 > th dose independent rect. 23 8
194 17.60 temperature 10.0 270 > th dose independent rect. 7 16
195 17.60 precipitation 0.1 270 < th dose independent rect. 6 19
197 17.60 radiation 10.0 270 < th dose dependent rect. 1 6
198 17.60 precipitation 0.1 270 < th dose dependent rect. 6 19
201 17.61 precipitation 0.1 270 < th dose independent rect. 23 8
202 17.61 atmosphere 1015.0 270 < th dose independent rect. 12 18
205 17.61 precipitation 0.1 270 < th dose dependent rect. 23 8
221 17.62 atmosphere 995.0 270 > th dose independent rect. 7 16
222 17.62 precipitation 0.1 270 < th dose independent rect. 18 17
226 17.62 precipitation 0.1 270 < th dose dependent rect. 18 17
228 17.63 temperature 10.0 30 > th dose independent rect. 12 8
230 17.63 temperature 10.0 1440 > th dose independent rect. 13 8
233 17.63 atmosphere 1015.0 30 < th dose independent rect. 12 8
234 17.63 temperature 10.0 30 > th dose independent rect. 20 16
235 17.63 temperature 10.0 1440 > th dose independent rect. 21 16
238 17.63 atmosphere 995.0 30 > th dose independent rect. 20 16
239 17.63 atmosphere 995.0 1440 > th dose independent rect. 21 16
241 17.63 radiation 40.0 10 < th dose independent rect. 14 18
252 17.64 humidity 50.0 10 > th dose dependent rect. 3 15
253 17.65 wind 9.0 10 < th dose independent rect. 8 4
254 17.65 radiation 1.0 30 > th dose independent rect. 8 4
256 17.65 wind 9.0 270 < th dose independent rect. 7 16
259 17.66 wind 1.0 30 > th dose independent rect. 8 4
260 17.66 temperature 10.0 1440 > th dose independent rect. 9 4
263 17.66 atmosphere 995.0 1440 > th dose independent rect. 9 4
264 17.66 radiation 1.0 10 > th dose independent rect. 8 6
269 17.66 atmosphere 1015.0 270 < th dose independent rect. 23 8
271 17.66 atmosphere 995.0 270 > th dose independent rect. 1 16
273 17.66 temperature 10.0 1440 > th dose independent rect. 13 20
285 17.67 atmosphere 995.0 30 > th dose independent rect. 8 4
286 17.67 atmosphere 1015.0 30 < th dose independent rect. 8 4
287 17.67 precipitation 0.1 30 < th dose independent rect. 8 4
295 17.67 temperature 10.0 30 > th dose independent rect. 12 20
299 17.67 precipitation 0.1 30 < th dose dependent rect. 8 4
307 17.68 humidity 90.0 10 < th dose dependent rect. 8 4
313 17.69 humidity 50.0 30 > th dose independent rect. 12 8
314 17.69 precipitation 0.1 30 < th dose independent rect. 20 16
318 17.69 wind 9.0 30 < th dose independent rect. 12 20
323 17.69 precipitation 0.1 30 < th dose dependent rect. 20 16
326 17.70 wind 1.0 10 > th dose independent rect. 12 8
328 17.70 wind 5.0 90 < th dose independent rect. 8 19
342 17.71 temperature 30.0 270 < th dose independent rect. 17 8
347 17.71 radiation 1.0 270 < th dose independent rect. 1 17
354 17.72 wind 1.0 270 > th dose independent rect. 6 6
357 17.72 precipitation 0.1 10 < th dose independent rect. 12 8
358 17.72 atmosphere 995.0 270 > th dose independent rect. 18 17
361 17.72 precipitation 0.1 10 < th dose dependent rect. 12 8
362 17.73 temperature 10.0 10 > th dose independent rect. 8 6
364 17.73 atmosphere 995.0 10 > th dose independent rect. 8 6
365 17.73 atmosphere 1015.0 10 < th dose independent rect. 8 6
366 17.73 precipitation 0.1 10 < th dose independent rect. 8 6
376 17.73 temperature 10.0 10 > th dose independent rect. 14 18
377 17.73 precipitation 0.1 10 < th dose dependent rect. 8 6
381 17.74 radiation 1.0 270 > th dose independent sin 5 NA
388 17.74 wind 9.0 270 < th dose independent rect. 11 7
389 17.74 temperature 10.0 270 > th dose independent rect. 11 7
391 17.74 atmosphere 1015.0 270 < th dose independent rect. 11 7
404 17.74 wind 1.0 270 > th dose independent rect. 12 17
406 17.74 temperature 10.0 270 > th dose independent rect. 18 17
418 17.75 humidity 50.0 30 > th dose independent rect. 14 18
425 17.76 wind 9.0 10 < th dose independent rect. 8 6
428 17.76 wind 1.0 270 > th dose independent rect. 11 7
432 17.76 humidity 50.0 270 > th dose independent rect. 18 17
433 17.76 atmosphere 995.0 270 > th dose independent rect. 6 19
436 17.76 atmosphere 1015.0 10 < th dose dependent rect. 8 6
440 17.77 radiation 1.0 270 < th dose independent sin 5 NA
443 17.77 wind 1.0 90 > th dose independent rect. 8 6
449 17.77 wind 5.0 90 < th dose independent rect. 8 17
455 17.78 humidity 90.0 270 < th dose independent rect. 8 2
464 17.78 radiation 1.0 10 > th dose dependent rect. 13 23
479 17.79 precipitation 0.1 10 < th dose independent rect. 12 20
485 17.79 precipitation 0.1 10 < th dose dependent rect. 12 20
491 17.80 wind 9.0 270 < th dose independent rect. 1 5
492 17.80 temperature 10.0 270 > th dose independent rect. 1 5
494 17.80 temperature 30.0 270 < th dose independent rect. 1 5
495 17.80 humidity 50.0 270 > th dose independent rect. 1 5
498 17.80 atmosphere 995.0 270 > th dose independent rect. 1 5
499 17.80 atmosphere 1010.0 270 < th dose independent rect. 1 5
504 17.80 precipitation 0.1 270 < th dose independent rect. 1 5
521 17.80 wind 9.0 10 < th dose independent rect. 14 18
524 17.80 temperature 10.0 270 > th dose independent rect. 6 19
527 17.80 temperature 10.0 30 > th dose dependent rect. 8 4
528 17.80 precipitation 0.1 270 < th dose dependent rect. 1 5
548 17.81 radiation 10.0 270 < th dose dependent sin 7 NA
549 17.81 wind 9.0 270 < th dose dependent rect. 6 6
570 17.82 wind 9.0 270 < th dose independent rect. 6 19
593 17.83 wind 1.0 270 > th dose independent rect. 1 16
599 17.83 precipitation 0.1 10 < th dose independent rect. 14 18
600 17.83 radiation 40.0 90 < th dose independent rect. 12 20
606 17.83 atmosphere 1015.0 10 < th dose dependent rect. 8 4
611 17.83 radiation 10.0 270 < th dose dependent rect. 1 15
612 17.83 precipitation 0.1 10 < th dose dependent rect. 14 18
641 17.84 humidity 50.0 90 > th dose dependent rect. 1 17
645 17.85 radiation 30.0 90 < th dose independent rect. 1 7
651 17.85 humidity 50.0 30 > th dose independent rect. 20 16
653 17.85 atmosphere 1015.0 30 < th dose independent rect. 12 20
686 17.86 atmosphere 1015.0 270 < th dose dependent rect. 7 4
689 17.87 temperature 10.0 1440 > th dose independent rect. 9 6
696 17.87 precipitation 0.1 90 < th dose independent rect. 1 7
699 17.87 temperature 10.0 1440 > th dose independent rect. 15 18
703 17.87 precipitation 0.1 90 < th dose dependent rect. 1 7
707 17.87 temperature 10.0 30 > th dose dependent rect. 20 16
737 17.89 temperature 10.0 90 > th dose independent rect. 1 7
739 17.89 temperature 30.0 90 < th dose independent rect. 1 7
740 17.89 humidity 50.0 90 > th dose independent rect. 1 7
742 17.89 atmosphere 995.0 90 > th dose independent rect. 1 7
743 17.89 atmosphere 1015.0 90 < th dose independent rect. 1 7
759 17.90 wind 9.0 90 < th dose independent rect. 1 7
767 17.90 precipitation 0.1 270 < th dose independent rect. 11 7
777 17.90 precipitation 0.1 270 < th dose dependent rect. 11 7
819 17.92 temperature 10.0 270 > th dose dependent rect. 18 7
877 17.95 atmosphere 1015.0 270 < th dose dependent rect. 8 2
888 17.96 humidity 50.0 30 > th dose independent rect. 8 4
907 17.96 wind 1.0 270 > th dose independent rect. 7 16
926 17.97 precipitation 0.1 270 < th dose independent rect. 4 23
933 17.97 precipitation 0.1 270 < th dose dependent rect. 4 23
938 17.98 temperature 30.0 270 < th dose independent rect. 6 6
949 17.98 wind 9.0 270 < th dose dependent rect. 7 3
963 17.99 atmosphere 1015.0 10 < th dose independent rect. 14 18
971 18.00 atmosphere 995.0 30 > th dose independent rect. 12 8
972 18.00 humidity 60.0 10 > th dose independent rect. 3 15
981 18.00 wind 9.0 90 < th dose dependent rect. 8 17
982 18.01 wind 1.0 270 > th dose independent rect. 8 2