Os01g0200100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0200100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.61 | 0.459 | 5.74 | -1.21 | 0.189 | -0.763 | 0.567 | -1.81 | 0.193 | 4.15 | 68.42 | 6152 | -- | -- |
| 100.02 | 0.466 | 5.75 | -1.15 | 0.16 | -0.845 | 0.7 | -- | 0.205 | 4.05 | 68.04 | 6209 | -- | -- |
| 96.42 | 0.457 | 5.74 | -1.21 | 0.201 | -0.744 | -- | -1.91 | 0.189 | 4.86 | 68.38 | 6132 | -- | -- |
| 101.34 | 0.469 | 5.75 | -1.15 | 0.168 | -0.819 | -- | -- | 0.205 | 4.82 | 68.42 | 6168 | -- | -- |
| 98.43 | 0.462 | 5.74 | -1.21 | -- | -0.789 | -- | -1.78 | 0.197 | -- | 68.49 | 6210 | -- | -- |
| 110.19 | 0.492 | 5.76 | -1.1 | 0.229 | -- | 0.558 | -- | 0.15 | 4.62 | -- | -- | -- | -- |
| 110.96 | 0.493 | 5.76 | -1.11 | 0.237 | -- | -- | -- | 0.147 | 5.1 | -- | -- | -- | -- |
| 102.77 | 0.472 | 5.74 | -1.14 | -- | -0.848 | -- | -- | 0.249 | -- | 70 | 6222 | -- | -- |
| 125.38 | 0.522 | 5.72 | -- | 0.274 | -0.807 | -- | -- | 0.218 | 4.03 | 50.05 | 7032 | -- | -- |
| 113.91 | 0.499 | 5.76 | -1.1 | -- | -- | -- | -- | 0.153 | -- | -- | -- | -- | -- |
| 143.24 | 0.56 | 5.73 | -- | 0.218 | -- | -- | -- | 0.271 | 5.27 | -- | -- | -- | -- |
| 124.64 | 0.52 | 5.75 | -- | -- | -0.919 | -- | -- | 0.206 | -- | 38.91 | 5712 | -- | -- |
| 145.72 | 0.563 | 5.73 | -- | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.95 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 2 | 95.07 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 4 | 95.48 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 9 | 3 |
| 10 | 96.14 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 12 | 96.21 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 29 | 96.40 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 1 | 11 |
| 30 | 96.40 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 14 |
| 129 | 97.20 | humidity | 70.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 156 | 97.41 | humidity | 70.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 161 | 97.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 162 | 97.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 190 | 97.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 205 | 97.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 222 | 97.69 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 8 | 2 |
| 252 | 97.80 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 19 | 19 |
| 335 | 97.91 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 21 |
| 368 | 97.98 | humidity | 70.0 | 270 | < th | dose independent | rect. | 12 | 5 |
| 377 | 98.01 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 16 | 20 |
| 417 | 98.06 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 3 | NA |
| 421 | 98.07 | humidity | 70.0 | 4320 | < th | dose dependent | sin | 1 | NA |
| 585 | 98.28 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 656 | 98.37 | humidity | 70.0 | 4320 | < th | dose dependent | no | NA | NA |
| 768 | 98.42 | humidity | 70.0 | 270 | > th | dose independent | sin | 20 | NA |
| 784 | 98.45 | humidity | 70.0 | 720 | < th | dose independent | rect. | 9 | 5 |
| 829 | 98.53 | humidity | 70.0 | 270 | < th | dose independent | sin | 20 | NA |
| 835 | 98.54 | humidity | 70.0 | 720 | < th | dose independent | rect. | 12 | 1 |
| 902 | 98.60 | humidity | 70.0 | 270 | < th | dose independent | rect. | 10 | 10 |
| 959 | 98.66 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 7 | 9 |