Os01g0198200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Casein kinase-like protein.
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Os01g0198200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Casein kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.6 | 0.138 | 12.4 | -0.441 | 0.468 | 0.174 | -0.322 | -0.0516 | 0.0976 | 14.2 | 39.98 | 2882 | -- | -- |
| 8.58 | 0.136 | 12.4 | -0.436 | 0.47 | 0.168 | -0.32 | -- | 0.0999 | 14.3 | 39.98 | 2644 | -- | -- |
| 8.91 | 0.139 | 12.4 | -0.441 | 0.468 | 0.171 | -- | -0.0587 | 0.103 | 14.3 | 39.62 | 2626 | -- | -- |
| 8.92 | 0.139 | 12.4 | -0.439 | 0.465 | 0.176 | -- | -- | 0.104 | 14.3 | 39.98 | 2625 | -- | -- |
| 21.35 | 0.215 | 12.4 | -0.463 | -- | 0.201 | -- | -0.199 | 0.0882 | -- | 38.48 | 2677 | -- | -- |
| 9.52 | 0.145 | 12.4 | -0.43 | 0.48 | -- | -0.305 | -- | 0.0763 | 14.1 | -- | -- | -- | -- |
| 9.86 | 0.147 | 12.4 | -0.439 | 0.48 | -- | -- | -- | 0.0745 | 14.2 | -- | -- | -- | -- |
| 21.21 | 0.214 | 12.4 | -0.494 | -- | 0.236 | -- | -- | 0.104 | -- | 37.8 | 2677 | -- | -- |
| 13.48 | 0.171 | 12.3 | -- | 0.499 | 0.206 | -- | -- | 0.181 | 14.1 | 40.01 | 1649 | -- | -- |
| 23.62 | 0.227 | 12.4 | -0.459 | -- | -- | -- | -- | 0.063 | -- | -- | -- | -- | -- |
| 14.94 | 0.181 | 12.4 | -- | 0.489 | -- | -- | -- | 0.123 | 14.2 | -- | -- | -- | -- |
| 26.14 | 0.238 | 12.3 | -- | -- | 0.257 | -- | -- | 0.199 | -- | 41.18 | 2691 | -- | -- |
| 29.18 | 0.252 | 12.4 | -- | -- | -- | -- | -- | 0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 8.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 2 | 8.25 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 14 | 8.26 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 15 | 8.30 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 19 | 8.41 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 21 | 8.43 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 23 | 8.44 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 24 | 8.45 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 27 | 8.46 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 28 | 8.46 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 4 |
| 33 | 8.49 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 36 | 8.49 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 40 | 8.50 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 41 | 8.50 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 42 | 8.51 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 48 | 8.53 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 7 |
| 60 | 8.54 | wind | 5.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 61 | 8.54 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 63 | 8.54 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 65 | 8.55 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 75 | 8.55 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 76 | 8.55 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 80 | 8.56 | wind | 5.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 81 | 8.56 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 82 | 8.56 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 101 | 8.56 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 102 | 8.57 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 103 | 8.57 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 3 |
| 104 | 8.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 106 | 8.57 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 107 | 8.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 120 | 8.57 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 3 |
| 126 | 8.58 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 132 | 8.59 | temperature | 25.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 134 | 8.59 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 135 | 8.59 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 7 | 2 |
| 138 | 8.59 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 3 |
| 139 | 8.59 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 155 | 8.59 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 157 | 8.59 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 165 | 8.59 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 171 | 8.60 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 172 | 8.60 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 173 | 8.60 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 175 | 8.60 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 176 | 8.60 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 182 | 8.60 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 198 | 8.60 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 16 | 17 |
| 202 | 8.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 218 | 8.60 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 7 |
| 221 | 8.60 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 5 | 9 |
| 224 | 8.60 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 242 | 8.61 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 256 | 8.61 | wind | 3.0 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 260 | 8.61 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 5 | NA |
| 263 | 8.61 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 277 | 8.61 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 6 |
| 310 | 8.62 | temperature | 25.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 315 | 8.62 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 332 | 8.62 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 11 |
| 346 | 8.62 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 3 | NA |
| 353 | 8.62 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 405 | 8.63 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 410 | 8.63 | wind | 5.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 432 | 8.63 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 435 | 8.63 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 436 | 8.63 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 437 | 8.63 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 438 | 8.63 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 469 | 8.63 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 10 | 11 |
| 482 | 8.63 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 20 |
| 488 | 8.64 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 491 | 8.64 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 492 | 8.64 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 494 | 8.64 | wind | 3.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 502 | 8.64 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 511 | 8.64 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 518 | 8.64 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 525 | 8.64 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 8 |
| 528 | 8.64 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 24 | 10 |
| 530 | 8.64 | wind | 3.0 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 552 | 8.64 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 553 | 8.64 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 634 | 8.65 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 652 | 8.65 | wind | 1.0 | 1440 | > th | dose independent | rect. | 8 | 6 |
| 655 | 8.65 | wind | 3.0 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 662 | 8.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 663 | 8.65 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 691 | 8.65 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 693 | 8.65 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 694 | 8.65 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 737 | 8.65 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 758 | 8.65 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 9 | 16 |
| 761 | 8.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 16 |
| 802 | 8.65 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 2 | 23 |
| 821 | 8.66 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 822 | 8.66 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 823 | 8.66 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 826 | 8.66 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 827 | 8.66 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 845 | 8.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 7 |
| 848 | 8.66 | wind | 3.0 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 871 | 8.66 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 20 | NA |
| 874 | 8.66 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 876 | 8.66 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 18 | 2 |