Os01g0197400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0197400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.26 | 0.316 | 13 | -0.79 | 1.06 | -1.34 | -0.493 | 0.789 | -0.15 | 21.9 | 19.28 | 12 | -- | -- |
| 45.73 | 0.315 | 13 | -0.923 | 1.07 | -1.32 | -0.644 | -- | -0.188 | 22 | 18.76 | 19 | -- | -- |
| 46.07 | 0.316 | 13 | -0.736 | 1.06 | -1.35 | -- | 1.05 | -0.135 | 22 | 19.1 | 11 | -- | -- |
| 47.33 | 0.32 | 13 | -0.896 | 1.08 | -1.33 | -- | -- | -0.189 | 22 | 18.46 | 23 | -- | -- |
| 107.49 | 0.486 | 13 | -0.561 | -- | -1.89 | -- | 1.42 | -0.0429 | -- | 19 | 6 | -- | -- |
| 70.4 | 0.393 | 13.1 | -1.21 | 1.32 | -- | -0.472 | -- | -0.414 | 23.2 | -- | -- | -- | -- |
| 71.35 | 0.396 | 13.1 | -1.19 | 1.33 | -- | -- | -- | -0.412 | 23.2 | -- | -- | -- | -- |
| 109.17 | 0.489 | 13 | -0.771 | -- | -1.95 | -- | -- | -0.105 | -- | 17.6 | 6 | -- | -- |
| 64.74 | 0.375 | 13 | -- | 1.21 | -1.99 | -- | -- | -0.0499 | 21.5 | 14.24 | 144 | -- | -- |
| 181.34 | 0.629 | 13 | -1.15 | -- | -- | -- | -- | -0.4 | -- | -- | -- | -- | -- |
| 108.44 | 0.487 | 13 | -- | 1.32 | -- | -- | -- | -0.28 | 23.2 | -- | -- | -- | -- |
| 123.64 | 0.518 | 13 | -- | -- | -2.27 | -- | -- | 0.00864 | -- | 16.3 | 2 | -- | -- |
| 216.45 | 0.687 | 13 | -- | -- | -- | -- | -- | -0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.04 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 5 | 44.59 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 14 | 44.83 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 32 | 45.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 34 | 45.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 71 | 45.49 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 76 | 45.58 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 77 | 45.60 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 81 | 45.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 85 | 45.67 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 98 | 45.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 109 | 45.81 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 117 | 45.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 134 | 45.99 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 7 |
| 152 | 46.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 257 | 46.25 | temperature | 20 | 1440 | > th | dose dependent | sin | 1 | NA |
| 299 | 46.30 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 395 | 46.41 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 417 | 46.43 | temperature | 10 | 1440 | > th | dose dependent | sin | 1 | NA |
| 700 | 46.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 21 |
| 989 | 46.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 990 | 46.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |