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Os01g0191700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Pyrophosphate-fructose-6-phosphate 1-phosphotransferase-like protein (Pyrophosphate-dependent phosphofructo-1-kinase-like protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.6 (0.0194) R2 : 0.595
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.23 (0.0499) R2dC : 0.54 R2C : 0.527
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.316 (0.0408) R2dN8 : 0.0687 R2N8 : 0.0551
σ : 0.366
deviance : 61.19
__
_____
C
peak time of C : 7.73
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
52.44 0.34 13.7 -0.153 1.28 -0.533 -0.683 1.1 0.182 7.75 24 549 -- --
53.22 0.34 13.6 -0.00894 1.29 -0.819 -0.425 -- 0.235 7.78 21.9 549 -- --
53.64 0.341 13.7 -0.128 1.29 -0.566 -- 0.877 0.188 7.72 23.72 513 -- --
53.74 0.341 13.6 -0.0192 1.29 -0.813 -- -- 0.235 7.79 21.93 549 -- --
133.86 0.542 13.7 -0.0502 -- -0.571 -- 0.797 0.237 -- 23.72 513 -- --
59.95 0.363 13.6 0.181 1.23 -- -0.404 -- 0.335 7.72 -- -- -- --
60.42 0.364 13.6 0.171 1.22 -- -- -- 0.335 7.74 -- -- -- --
134.92 0.543 13.7 0.0476 -- -0.652 -- -- 0.256 -- 23.72 513 -- --
53.75 0.341 13.6 -- 1.29 -0.806 -- -- 0.237 7.79 21.95 546 -- --
141.4 0.556 13.6 0.186 -- -- -- -- 0.353 -- -- -- -- --
61.19 0.366 13.6 -- 1.23 -- -- -- 0.316 7.73 -- -- -- --
134.97 0.543 13.7 -- -- -0.668 -- -- 0.249 -- 23.72 513 -- --
142.32 0.557 13.7 -- -- -- -- -- 0.332 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.66 temperature 15.0 270 > th dose dependent rect. 2 7
3 41.91 temperature 15.0 270 > th dose dependent rect. 3 5
4 42.31 temperature 15.0 270 > th dose dependent rect. 4 3
6 42.62 temperature 15.0 90 > th dose independent rect. 5 18
10 42.88 temperature 15.0 270 > th dose independent rect. 3 18
14 43.18 radiation 1.0 90 < th dose dependent sin 9 NA
16 43.24 temperature 15.0 270 > th dose independent rect. 2 20
17 43.27 temperature 15.0 270 > th dose independent rect. 1 22
22 43.51 temperature 20.0 270 > th dose independent rect. 4 3
24 43.66 temperature 20.0 270 > th dose independent rect. 3 5
26 43.67 radiation 1.0 90 < th dose dependent rect. 23 12
38 44.02 temperature 20.0 270 > th dose dependent rect. 5 1
39 44.08 radiation 1.0 30 > th dose independent sin 9 NA
40 44.09 radiation 1.0 30 < th dose independent sin 9 NA
59 44.66 radiation 20.0 270 < th dose independent rect. 15 16
60 44.71 temperature 15.0 10 > th dose dependent rect. 5 6
70 44.87 radiation 1.0 90 < th dose independent rect. 23 12
71 44.87 wind 9.0 90 < th dose dependent rect. 4 7
72 44.89 radiation 1.0 30 < th dose independent rect. 23 9
115 45.22 wind 7.0 270 < th dose independent rect. 21 6
127 45.37 wind 7.0 90 < th dose independent rect. 23 6
130 45.40 atmosphere 1015.0 90 < th dose independent rect. 5 18
134 45.43 wind 3.0 30 < th dose independent rect. 5 6
143 45.44 temperature 10.0 90 > th dose independent rect. 23 6
144 45.44 temperature 30.0 90 < th dose independent rect. 23 6
145 45.44 humidity 50.0 90 > th dose independent rect. 23 6
148 45.44 atmosphere 995.0 90 > th dose independent rect. 23 6
149 45.44 radiation 20.0 90 < th dose independent rect. 23 6
156 45.47 wind 9.0 90 < th dose independent rect. 5 18
168 45.54 radiation 20.0 270 < th dose independent rect. 17 14
171 45.56 temperature 20.0 270 > th dose independent rect. 5 1
175 45.58 precipitation 0.1 270 < th dose independent rect. 21 6
177 45.58 precipitation 0.1 270 < th dose dependent rect. 21 6
182 45.60 atmosphere 1015.0 270 < th dose independent rect. 3 18
183 45.60 radiation 40.0 270 < th dose dependent rect. 15 16
203 45.62 radiation 1.0 270 < th dose dependent rect. 21 6
204 45.63 temperature 10.0 270 > th dose independent rect. 21 6
205 45.63 temperature 30.0 270 < th dose independent rect. 21 6
206 45.63 humidity 50.0 270 > th dose independent rect. 21 6
209 45.63 atmosphere 995.0 270 > th dose independent rect. 21 6
210 45.63 radiation 1.0 270 < th dose independent rect. 21 6
222 45.64 precipitation 0.1 90 < th dose independent rect. 11 17
223 45.64 temperature 15.0 10 > th dose dependent rect. 5 4
224 45.64 precipitation 0.1 90 < th dose dependent rect. 11 17
225 45.65 humidity 80.0 270 > th dose independent rect. 4 3
232 45.67 wind 1.0 90 > th dose independent rect. 23 6
239 45.74 atmosphere 995.0 270 > th dose independent rect. 17 14
243 45.77 precipitation 0.1 90 < th dose independent rect. 23 6
244 45.77 precipitation 0.1 90 < th dose dependent rect. 23 6
246 45.78 radiation 10.0 270 < th dose independent rect. 4 3
247 45.78 temperature 15.0 270 > th dose independent rect. 13 9
253 45.81 precipitation 0.1 270 < th dose independent rect. 7 10
254 45.81 precipitation 0.1 270 < th dose dependent rect. 7 10
259 45.84 radiation 1.0 30 > th dose independent rect. 18 17
261 45.85 temperature 10.0 270 > th dose independent rect. 7 10
262 45.85 atmosphere 1015.0 270 < th dose independent rect. 7 10
263 45.85 temperature 10.0 270 > th dose independent rect. 17 14
268 45.87 precipitation 0.1 270 < th dose independent rect. 3 18
270 45.87 temperature 10.0 10 > th dose dependent rect. 5 18
271 45.87 precipitation 0.1 270 < th dose dependent rect. 3 18
275 45.91 precipitation 0.1 270 < th dose independent rect. 2 7
276 45.91 precipitation 0.1 270 < th dose dependent rect. 2 7
287 46.00 precipitation 0.1 270 < th dose independent rect. 4 3
288 46.00 precipitation 0.1 270 < th dose dependent rect. 4 3
291 46.02 radiation 40.0 270 < th dose independent rect. 13 9
292 46.02 wind 9.0 270 < th dose dependent rect. 4 3
293 46.03 wind 3.0 270 < th dose independent rect. 4 3
316 46.13 humidity 50.0 270 > th dose dependent rect. 4 3
318 46.13 humidity 50.0 90 > th dose dependent rect. 23 5
319 46.14 wind 7.0 270 < th dose independent rect. 4 3
326 46.17 precipitation 0.1 90 < th dose independent rect. 4 7
327 46.17 precipitation 0.1 90 < th dose dependent rect. 4 7
329 46.18 temperature 10.0 270 > th dose independent rect. 4 3
331 46.18 temperature 30.0 270 < th dose independent rect. 4 3
332 46.18 humidity 50.0 270 > th dose independent rect. 4 3
334 46.18 atmosphere 995.0 270 > th dose independent rect. 4 3
335 46.18 atmosphere 1015.0 270 < th dose independent rect. 4 3
337 46.18 temperature 10.0 270 > th dose independent rect. 7 21
339 46.18 radiation 40.0 90 < th dose dependent rect. 5 18
343 46.19 wind 9.0 90 < th dose dependent rect. 23 5
344 46.20 radiation 1.0 90 > th dose independent rect. 4 3
354 46.20 wind 9.0 270 < th dose independent rect. 17 14
361 46.22 precipitation 0.1 270 < th dose independent rect. 9 17
362 46.22 precipitation 0.1 270 < th dose dependent rect. 9 17
364 46.24 precipitation 0.1 270 < th dose independent rect. 17 14
365 46.24 radiation 1.0 30 > th dose independent rect. 18 15
368 46.24 atmosphere 995.0 270 > th dose dependent rect. 4 3
369 46.24 precipitation 0.1 270 < th dose dependent rect. 17 14
380 46.28 radiation 20.0 270 < th dose independent rect. 3 5
385 46.29 atmosphere 995.0 90 > th dose independent rect. 4 7
386 46.29 atmosphere 1015.0 90 < th dose independent rect. 4 7
388 46.29 temperature 10.0 90 > th dose independent rect. 11 17
395 46.31 wind 5.0 270 < th dose independent rect. 23 2
397 46.31 humidity 50.0 90 > th dose independent rect. 4 7
399 46.31 wind 9.0 10 < th dose dependent rect. 5 18
404 46.32 radiation 40.0 270 < th dose dependent rect. 4 3
434 46.33 precipitation 0.1 270 < th dose independent rect. 7 20
445 46.33 precipitation 0.1 270 < th dose dependent rect. 7 20
446 46.34 radiation 40.0 30 < th dose independent rect. 5 6
447 46.34 wind 9.0 10 < th dose independent rect. 5 18
450 46.35 radiation 1.0 30 > th dose independent rect. 5 6
482 46.37 atmosphere 995.0 270 > th dose independent rect. 3 18
490 46.38 radiation 10.0 90 < th dose independent rect. 5 18
496 46.40 wind 9.0 270 < th dose independent rect. 7 21
497 46.41 wind 9.0 90 < th dose independent rect. 11 17
518 46.47 temperature 10.0 270 > th dose independent rect. 2 7
520 46.47 humidity 50.0 270 > th dose independent rect. 2 7
521 46.47 atmosphere 995.0 270 > th dose independent rect. 2 7
522 46.47 atmosphere 1015.0 270 < th dose independent rect. 2 7
524 46.47 temperature 10.0 270 > th dose independent rect. 9 17
527 46.48 temperature 10.0 270 > th dose independent rect. 23 2
528 46.48 temperature 30.0 270 < th dose independent rect. 23 2
529 46.48 humidity 50.0 270 > th dose independent rect. 23 2
532 46.48 atmosphere 995.0 270 > th dose independent rect. 23 2
533 46.48 radiation 1.0 270 < th dose independent rect. 23 2
539 46.48 radiation 1.0 270 < th dose dependent rect. 23 2
554 46.52 wind 9.0 270 < th dose independent rect. 2 20
556 46.53 precipitation 0.1 270 < th dose independent rect. 23 2
558 46.53 precipitation 0.1 270 < th dose dependent rect. 23 2
575 46.57 atmosphere 1015.0 270 < th dose independent rect. 2 20
591 46.59 radiation 40.0 270 < th dose independent rect. 2 7
595 46.59 humidity 50.0 270 > th dose dependent rect. 3 5
598 46.60 wind 9.0 270 < th dose independent rect. 9 17
600 46.60 atmosphere 995.0 10 > th dose dependent rect. 5 6
605 46.62 wind 9.0 270 < th dose independent rect. 7 10
621 46.63 radiation 40.0 270 < th dose dependent rect. 3 6
632 46.68 precipitation 0.1 270 < th dose independent rect. 2 20
634 46.68 precipitation 0.1 270 < th dose dependent rect. 2 20
637 46.69 humidity 50.0 270 > th dose independent rect. 17 14
640 46.70 temperature 10.0 270 > th dose independent rect. 22 15
641 46.70 atmosphere 995.0 270 > th dose independent rect. 22 15
663 46.74 humidity 50.0 270 > th dose dependent rect. 21 6
683 46.76 wind 9.0 270 < th dose independent rect. 8 19
689 46.78 temperature 30.0 270 < th dose independent rect. 2 7
697 46.78 precipitation 0.1 10 < th dose independent rect. 5 18
700 46.78 precipitation 0.1 10 < th dose dependent rect. 5 18
705 46.79 humidity 50.0 270 > th dose dependent rect. 23 2
720 46.81 radiation 10.0 270 < th dose independent rect. 5 1
748 46.82 humidity 50.0 10 > th dose dependent rect. 23 6
758 46.85 atmosphere 995.0 90 > th dose dependent rect. 23 5
762 46.86 atmosphere 1015.0 90 < th dose independent rect. 23 5
765 46.86 wind 9.0 270 < th dose dependent rect. 23 2
787 46.91 humidity 60.0 10 > th dose independent rect. 5 6
795 46.94 temperature 30.0 90 < th dose dependent rect. 23 6
806 46.98 wind 9.0 270 < th dose dependent rect. 21 6
811 46.99 precipitation 0.1 10 < th dose independent rect. 5 6
813 46.99 precipitation 0.1 10 < th dose dependent rect. 5 6
835 47.01 wind 9.0 270 < th dose independent rect. 1 22
844 47.02 temperature 10.0 10 > th dose independent rect. 5 6
847 47.02 atmosphere 995.0 10 > th dose independent rect. 5 6
848 47.02 atmosphere 1015.0 10 < th dose independent rect. 5 6
849 47.02 temperature 10.0 10 > th dose independent rect. 11 18
892 47.10 wind 9.0 270 < th dose independent rect. 22 15
905 47.13 wind 1.0 270 > th dose independent rect. 7 10
915 47.15 atmosphere 995.0 270 > th dose independent rect. 2 20
932 47.21 atmosphere 995.0 270 > th dose dependent rect. 23 3
934 47.22 wind 9.0 270 < th dose independent rect. 13 9
980 47.33 radiation 40.0 10 < th dose dependent rect. 5 19