Os01g0191400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0191400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 323.96 | 0.846 | 3.13 | 0.474 | 0.201 | 1.11 | 0.00885 | 1.53 | -0.0226 | 16.8 | 0.84 | 1416 | -- | -- |
| 324.77 | 0.839 | 3.11 | 0.622 | 0.198 | 0.795 | -0.00476 | -- | -0.0133 | 16.6 | 1.183 | 1390 | -- | -- |
| 323.85 | 0.838 | 3.13 | 0.489 | 0.203 | 1.12 | -- | 1.44 | -0.0188 | 17.2 | 0.7978 | 1406 | -- | -- |
| 324.37 | 0.839 | 3.11 | 0.634 | 0.242 | 0.88 | -- | -- | -0.000343 | 18.5 | 1.17 | 1360 | -- | -- |
| 325.97 | 0.841 | 3.13 | 0.464 | -- | 1.14 | -- | 1.59 | -0.0295 | -- | 0.7942 | 1403 | -- | -- |
| 332.19 | 0.854 | 3.13 | 0.437 | 0.233 | -- | 0.127 | -- | -0.103 | 15.6 | -- | -- | -- | -- |
| 332.24 | 0.854 | 3.13 | 0.439 | 0.234 | -- | -- | -- | -0.102 | 15.7 | -- | -- | -- | -- |
| 327 | 0.842 | 3.11 | 0.62 | -- | 0.811 | -- | -- | -0.00648 | -- | 1.17 | 1385 | -- | -- |
| 333.83 | 0.851 | 3.12 | -- | 0.229 | 0.636 | -- | -- | -0.0716 | 18.7 | 1.561 | 1336 | -- | -- |
| 335.28 | 0.856 | 3.13 | 0.429 | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
| 337.31 | 0.859 | 3.14 | -- | 0.226 | -- | -- | -- | -0.151 | 15.7 | -- | -- | -- | -- |
| 335.93 | 0.854 | 3.13 | -- | -- | 0.538 | -- | -- | -0.103 | -- | 1.5 | 1379 | -- | -- |
| 340.13 | 0.861 | 3.14 | -- | -- | -- | -- | -- | -0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 309.45 | humidity | 80.0 | 90 | < th | dose independent | rect. | 5 | 2 |
| 2 | 309.92 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 3 | 311.29 | wind | 7.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 7 | 312.47 | wind | 3.0 | 90 | > th | dose dependent | rect. | 5 | 2 |
| 8 | 312.69 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 2 |
| 9 | 313.23 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 11 | 313.44 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 18 | 314.31 | wind | 3.0 | 90 | > th | dose independent | rect. | 5 | 2 |
| 23 | 315.08 | wind | 3.0 | 10 | > th | dose independent | rect. | 5 | 2 |
| 35 | 316.06 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 18 |
| 37 | 316.16 | wind | 7.0 | 10 | > th | dose independent | rect. | 16 | 1 |
| 55 | 317.22 | radiation | 40.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 73 | 317.25 | radiation | 30.0 | 30 | < th | dose independent | rect. | 17 | 21 |
| 112 | 319.30 | wind | 1.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 117 | 319.40 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 122 | 319.40 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 125 | 319.40 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 160 | 319.75 | radiation | 30.0 | 30 | < th | dose independent | rect. | 24 | 14 |
| 180 | 320.08 | humidity | 80.0 | 720 | > th | dose independent | rect. | 24 | 5 |
| 202 | 320.44 | wind | 5.0 | 90 | > th | dose dependent | rect. | 23 | 1 |
| 214 | 320.59 | radiation | 30.0 | 30 | < th | dose independent | sin | 11 | NA |
| 221 | 320.64 | wind | 9.0 | 720 | > th | dose independent | rect. | 22 | 1 |
| 225 | 320.64 | wind | 9.0 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 237 | 320.74 | humidity | 80.0 | 720 | < th | dose independent | rect. | 11 | 1 |
| 278 | 320.92 | radiation | 30.0 | 30 | > th | dose independent | sin | 11 | NA |
| 280 | 320.93 | humidity | 80.0 | 90 | < th | dose independent | rect. | 21 | 12 |
| 304 | 320.98 | radiation | 30.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 313 | 321.09 | temperature | 20.0 | 90 | < th | dose independent | rect. | 6 | 1 |
| 314 | 321.10 | radiation | 20.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 325 | 321.14 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 11 |
| 400 | 321.30 | wind | 7.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 402 | 321.31 | wind | 5.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 403 | 321.31 | humidity | 80.0 | 720 | > th | dose independent | rect. | 1 | 2 |
| 421 | 321.47 | humidity | 90.0 | 720 | < th | dose independent | rect. | 8 | 4 |
| 430 | 321.53 | humidity | 80.0 | 10 | < th | dose independent | rect. | 21 | 13 |
| 442 | 321.57 | wind | 5.0 | 10 | > th | dose dependent | rect. | 1 | 8 |
| 443 | 321.58 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 445 | 321.58 | wind | 5.0 | 90 | < th | dose independent | rect. | 12 | 23 |
| 458 | 321.63 | radiation | 30.0 | 30 | < th | dose independent | rect. | 3 | 11 |
| 532 | 321.90 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 16 | 15 |
| 536 | 321.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 24 | 16 |
| 539 | 321.94 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 13 |
| 541 | 321.95 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 559 | 321.95 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 19 |
| 563 | 321.97 | wind | 3.0 | 90 | < th | dose dependent | rect. | 8 | 11 |
| 573 | 322.02 | wind | 3.0 | 90 | < th | dose independent | rect. | 9 | 1 |
| 576 | 322.02 | radiation | 30.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 581 | 322.03 | wind | 3.0 | 90 | < th | dose dependent | rect. | 8 | 2 |
| 583 | 322.05 | humidity | 80.0 | 10 | < th | dose independent | rect. | 1 | 9 |
| 585 | 322.05 | wind | 3.0 | 720 | < th | dose dependent | rect. | 11 | 3 |
| 618 | 322.17 | wind | 1.0 | 720 | < th | dose independent | rect. | 11 | 2 |
| 628 | 322.23 | radiation | 40.0 | 10 | < th | dose independent | rect. | 10 | 2 |
| 639 | 322.26 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 658 | 322.33 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 663 | 322.35 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 666 | 322.36 | humidity | 80.0 | 720 | < th | dose independent | rect. | 22 | 1 |
| 683 | 322.38 | radiation | 30.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 688 | 322.40 | wind | 5.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 714 | 322.46 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 14 | 3 |
| 732 | 322.52 | wind | 1.0 | 720 | < th | dose dependent | rect. | 11 | 6 |
| 733 | 322.53 | wind | 1.0 | 720 | < th | dose independent | rect. | 11 | 4 |
| 766 | 322.57 | wind | 5.0 | 720 | > th | dose independent | rect. | 21 | 1 |
| 777 | 322.59 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 793 | 322.63 | radiation | 30.0 | 30 | > th | dose independent | rect. | 12 | 22 |
| 796 | 322.64 | wind | 5.0 | 10 | > th | dose independent | rect. | 14 | 3 |
| 799 | 322.64 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 805 | 322.66 | wind | 7.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 809 | 322.67 | radiation | 30.0 | 30 | > th | dose dependent | sin | 10 | NA |
| 812 | 322.68 | radiation | 40.0 | 10 | < th | dose independent | rect. | 21 | 16 |
| 829 | 322.71 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 831 | 322.71 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 17 | 20 |
| 859 | 322.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 13 |
| 867 | 322.75 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 9 |
| 889 | 322.82 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 912 | 322.85 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 10 | 3 |
| 923 | 322.89 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 929 | 322.91 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 11 |
| 995 | 323.05 | wind | 3.0 | 90 | > th | dose independent | rect. | 9 | 8 |
| 1000 | 323.06 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 6 |