Os01g0189700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0189700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ankyrin repeat containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 84.45 | 0.432 | 7.51 | 0.00473 | 1.35 | 0.788 | -0.42 | 1.44 | 0.819 | 20.7 | 66.08 | 7767 | -- | -- |
| 87.41 | 0.435 | 7.53 | 0.0277 | 1.34 | 0.788 | -0.518 | -- | 0.805 | 20.6 | 67 | 7759 | -- | -- |
| 85.03 | 0.429 | 7.51 | 0.0163 | 1.35 | 0.78 | -- | 1.5 | 0.82 | 20.7 | 66.26 | 7766 | -- | -- |
| 88.27 | 0.438 | 7.53 | 0.0586 | 1.35 | 0.789 | -- | -- | 0.81 | 20.6 | 67 | 7748 | -- | -- |
| 179.43 | 0.624 | 7.47 | 0.0527 | -- | 0.746 | -- | 1.68 | 0.826 | -- | 66.03 | 8676 | -- | -- |
| 97.65 | 0.463 | 7.53 | 0.186 | 1.29 | -- | -0.485 | -- | 0.775 | 20.7 | -- | -- | -- | -- |
| 98.43 | 0.465 | 7.53 | 0.202 | 1.29 | -- | -- | -- | 0.776 | 20.7 | -- | -- | -- | -- |
| 181.47 | 0.627 | 7.49 | 0.0278 | -- | 0.816 | -- | -- | 0.818 | -- | 67 | 8690 | -- | -- |
| 88.03 | 0.437 | 7.51 | -- | 1.29 | 0.77 | -- | -- | 0.849 | 20.8 | 68 | 8497 | -- | -- |
| 192.44 | 0.648 | 7.5 | 0.2 | -- | -- | -- | -- | 0.765 | -- | -- | -- | -- | -- |
| 99.51 | 0.467 | 7.54 | -- | 1.29 | -- | -- | -- | 0.753 | 20.7 | -- | -- | -- | -- |
| 181.48 | 0.627 | 7.49 | -- | -- | 0.827 | -- | -- | 0.819 | -- | 66.13 | 8684 | -- | -- |
| 193.49 | 0.649 | 7.5 | -- | -- | -- | -- | -- | 0.743 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.40 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 2 | 77.47 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 11 | 78.45 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 17 | 78.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 20 | 78.96 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 22 | 79.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 23 | 79.11 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 24 | 79.19 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 3 | 3 |
| 25 | 79.21 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 50 | 79.84 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 57 | 79.94 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 60 | 79.96 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 9 |
| 65 | 79.97 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 3 | 7 |
| 68 | 80.01 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 3 | 9 |
| 73 | 80.05 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 135 | 80.43 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 140 | 80.45 | wind | 1.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 145 | 80.50 | wind | 9.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 149 | 80.50 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 19 | 18 |
| 178 | 80.63 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 258 | 80.86 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 298 | 81.03 | wind | 9.0 | 14400 | < th | dose independent | rect. | 19 | 18 |
| 317 | 81.12 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 323 | 81.12 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 17 |
| 343 | 81.26 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 368 | 81.38 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 20 | 12 |
| 396 | 81.49 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 399 | 81.50 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 407 | 81.53 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 421 | 81.59 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 422 | 81.60 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 431 | 81.64 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 436 | 81.66 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 18 |
| 443 | 81.67 | wind | 3.0 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 455 | 81.70 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 482 | 81.75 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 486 | 81.76 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 518 | 81.84 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 550 | 81.90 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 553 | 81.90 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 590 | 81.99 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 669 | 82.17 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 679 | 82.19 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 681 | 82.20 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 701 | 82.24 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 706 | 82.24 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 711 | 82.24 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 15 |
| 739 | 82.30 | wind | 9.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 793 | 82.38 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 849 | 82.48 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 857 | 82.50 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 3 |
| 877 | 82.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 881 | 82.54 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 6 |
| 895 | 82.57 | wind | 1.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 943 | 82.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 2 | 18 |
| 962 | 82.70 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 996 | 82.76 | wind | 3.0 | 43200 | > th | dose independent | rect. | 16 | 16 |