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Os01g0185500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1637 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.49 (0.0172) R2 : 0.426
β1 : -1.13 (0.0628) R2dD : 0.42 R2D : 0.426
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.024 (0.0366) R2dN8 : 0.000726 R2N8 : 0.00641
σ : 0.322
deviance : 47.48
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.37 0.271 9.54 -1.5 0.291 -0.734 -0.344 0.246 -0.171 14.4 24.19 3278 -- --
33.41 0.269 9.53 -1.46 0.285 -0.782 -0.347 -- -0.163 14.4 23.7 3273 -- --
33.78 0.271 9.54 -1.5 0.291 -0.734 -- 0.22 -0.171 14.6 24.09 3256 -- --
33.82 0.271 9.53 -1.47 0.292 -0.78 -- -- -0.162 14.7 23.74 3270 -- --
38.31 0.29 9.53 -1.35 -- -0.697 -- 0.484 -0.107 -- 24.09 3256 -- --
42.69 0.306 9.49 -1.11 0.275 -- -0.314 -- 0.0327 14.5 -- -- -- --
43.02 0.307 9.49 -1.11 0.277 -- -- -- 0.0311 14.8 -- -- -- --
38.71 0.291 9.52 -1.29 -- -0.74 -- -- -0.0942 -- 24.09 3256 -- --
75.32 0.406 9.47 -- 0.275 -0.175 -- -- 0.133 15 23.74 3270 -- --
47.48 0.322 9.49 -1.13 -- -- -- -- 0.024 -- -- -- -- --
75.78 0.407 9.46 -- 0.299 -- -- -- 0.155 14.8 -- -- -- --
79.35 0.416 9.47 -- -- -0.306 -- -- 0.108 -- 24.09 3256 -- --
80.96 0.42 9.46 -- -- -- -- -- 0.149 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.20 temperature 30 270 < th dose dependent rect. 11 20
3 32.53 humidity 60 43200 < th dose independent rect. 19 15
4 32.55 humidity 70 43200 > th dose independent rect. 21 12
9 32.58 temperature 10 270 > th dose dependent rect. 7 19
13 32.64 humidity 60 43200 > th dose independent rect. 19 15
18 32.68 temperature 10 270 > th dose dependent rect. 8 17
21 32.70 humidity 60 43200 < th dose independent rect. 8 2
31 32.76 humidity 70 43200 > th dose independent rect. 4 5
38 32.82 humidity 60 43200 > th dose independent rect. 8 1
40 32.83 humidity 60 43200 < th dose dependent rect. 19 15
47 32.86 radiation 20 14400 < th dose independent rect. 21 9
48 32.86 temperature 30 270 < th dose dependent rect. 13 18
56 32.89 radiation 20 14400 > th dose dependent rect. 17 14
60 32.91 radiation 10 14400 > th dose dependent rect. 5 2
78 32.94 humidity 90 43200 < th dose dependent rect. 20 1
85 32.96 humidity 70 43200 < th dose dependent rect. 8 1
88 32.97 humidity 70 43200 > th dose independent rect. 16 6
113 33.00 humidity 70 43200 < th dose independent rect. 16 7
131 33.03 humidity 80 43200 < th dose dependent rect. 17 5
138 33.04 radiation 20 14400 < th dose independent rect. 19 11
146 33.05 temperature 20 14400 < th dose dependent rect. 3 1
149 33.06 humidity 80 43200 > th dose independent rect. 19 5
160 33.07 humidity 80 43200 < th dose independent rect. 18 6
163 33.08 humidity 50 43200 > th dose independent sin 9 NA
170 33.09 humidity 50 43200 > th dose independent rect. 18 18
171 33.09 humidity 60 43200 < th dose dependent sin 8 NA
185 33.11 humidity 50 43200 > th dose independent rect. 17 20
186 33.11 humidity 50 43200 > th dose independent rect. 17 22
204 33.13 radiation 10 14400 > th dose independent rect. 5 2
230 33.14 humidity 50 43200 < th dose independent rect. 17 20
233 33.14 wind 5 43200 > th dose dependent rect. 15 1
240 33.15 humidity 80 43200 > th dose independent rect. 20 3
244 33.15 wind 3 43200 < th dose dependent rect. 21 1
260 33.16 wind 7 43200 > th dose independent rect. 21 21
269 33.16 wind 7 43200 > th dose dependent rect. 11 21
270 33.17 humidity 50 43200 < th dose independent sin 9 NA
280 33.17 wind 9 43200 > th dose independent rect. 13 19
296 33.18 wind 7 43200 > th dose independent rect. 3 14
302 33.18 humidity 50 43200 > th dose independent rect. 9 23
311 33.19 humidity 50 43200 > th dose independent no NA NA
312 33.19 humidity 70 43200 < th dose independent sin 17 NA
319 33.19 humidity 50 43200 > th dose independent rect. 4 18
320 33.19 wind 7 43200 > th dose independent rect. 23 19
326 33.19 wind 7 43200 > th dose independent rect. 11 21
327 33.19 wind 7 43200 < th dose independent rect. 21 21
344 33.19 humidity 50 43200 > th dose independent rect. 7 23
352 33.19 humidity 50 43200 > th dose dependent rect. 19 2
355 33.19 humidity 60 43200 < th dose dependent rect. 2 11
362 33.20 humidity 80 43200 < th dose independent rect. 21 1
373 33.20 humidity 50 43200 > th dose independent rect. 11 20
376 33.20 wind 7 43200 < th dose independent rect. 11 21
412 33.21 wind 7 43200 < th dose independent rect. 3 14
436 33.21 humidity 60 43200 < th dose dependent rect. 3 7
448 33.22 humidity 50 43200 > th dose independent rect. 3 13
457 33.22 humidity 50 43200 > th dose independent rect. 23 16
471 33.22 wind 7 43200 < th dose independent rect. 23 19
486 33.22 humidity 50 43200 < th dose independent rect. 11 20
496 33.22 humidity 50 43200 < th dose independent rect. 9 22
509 33.22 wind 7 43200 > th dose dependent rect. 9 8
514 33.23 humidity 50 43200 < th dose independent no NA NA
516 33.23 humidity 50 43200 > th dose independent rect. 4 11
537 33.23 humidity 50 43200 < th dose independent rect. 4 18
544 33.23 humidity 70 43200 < th dose independent rect. 6 19
552 33.23 wind 7 43200 > th dose independent rect. 3 21
588 33.23 wind 7 43200 > th dose dependent sin 21 NA
590 33.23 humidity 60 43200 < th dose dependent rect. 7 6
597 33.24 wind 7 43200 < th dose independent rect. 24 1
674 33.25 humidity 50 43200 < th dose independent sin 4 NA
677 33.25 wind 7 43200 > th dose independent rect. 15 1
710 33.25 wind 7 43200 < th dose independent rect. 4 20
741 33.25 humidity 50 43200 < th dose independent rect. 13 23
745 33.25 temperature 20 14400 < th dose dependent rect. 5 1
747 33.25 humidity 50 43200 > th dose dependent rect. 18 4
757 33.26 humidity 70 43200 > th dose independent sin 17 NA
760 33.26 wind 7 43200 < th dose independent rect. 15 1
761 33.26 humidity 80 43200 > th dose independent rect. 21 1
836 33.26 humidity 60 43200 < th dose dependent rect. 11 1
842 33.26 wind 7 43200 > th dose dependent rect. 9 16
848 33.27 wind 7 43200 > th dose independent sin 1 NA
849 33.27 wind 7 43200 > th dose independent no NA NA
851 33.27 humidity 50 43200 < th dose independent sin 1 NA
856 33.27 humidity 50 43200 > th dose independent rect. 9 6
865 33.27 humidity 50 43200 < th dose independent rect. 11 11
968 33.28 humidity 50 43200 < th dose independent rect. 5 10
987 33.28 humidity 70 43200 > th dose independent rect. 6 18