Os01g0185300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os01g0185300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.67 | 0.533 | 10.8 | -1.13 | 0.877 | 0.482 | -0.142 | -1 | -0.3 | 2.05 | 20.2 | 257 | -- | -- |
| 130.87 | 0.537 | 10.8 | -0.967 | 0.928 | 0.642 | 0.0346 | -- | -0.249 | 1.8 | 19.3 | 205 | -- | -- |
| 128.74 | 0.528 | 10.8 | -1.12 | 0.878 | 0.487 | -- | -0.959 | -0.297 | 2.03 | 20.3 | 254 | -- | -- |
| 130.83 | 0.533 | 10.8 | -1.01 | 0.905 | 0.724 | -- | -- | -0.259 | 2 | 19.3 | 211 | -- | -- |
| 168.46 | 0.604 | 10.8 | -1.15 | -- | 0.496 | -- | -0.987 | -0.314 | -- | 20.53 | 856 | -- | -- |
| 143.23 | 0.561 | 10.8 | -0.777 | 0.802 | -- | 0.166 | -- | -0.154 | 1.93 | -- | -- | -- | -- |
| 143.33 | 0.561 | 10.8 | -0.782 | 0.802 | -- | -- | -- | -0.155 | 1.95 | -- | -- | -- | -- |
| 169.78 | 0.607 | 10.8 | -1.1 | -- | 0.789 | -- | -- | -0.32 | -- | 19.11 | 2311 | -- | -- |
| 153.91 | 0.581 | 10.8 | -- | 0.867 | 0.413 | -- | -- | -0.115 | 1.82 | 19.3 | 211 | -- | -- |
| 182.12 | 0.631 | 10.8 | -0.748 | -- | -- | -- | -- | -0.137 | -- | -- | -- | -- | -- |
| 159.44 | 0.591 | 10.8 | -- | 0.788 | -- | -- | -- | -0.0681 | 1.93 | -- | -- | -- | -- |
| 166.11 | 0.602 | 10.7 | -- | -- | -0.558 | -- | -- | 0.0728 | -- | 26.34 | 47520 | -- | -- |
| 196.9 | 0.655 | 10.8 | -- | -- | -- | -- | -- | -0.0535 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 117.80 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 9 | 120.37 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 12 | 120.66 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 25 | 121.77 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 19 |
| 31 | 122.01 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 56 | 123.51 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 21 | 8 |
| 69 | 124.12 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 75 | 124.22 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 77 | 124.22 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 2 |
| 88 | 124.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 89 | 124.58 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 93 | 124.58 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 95 | 124.64 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 10 | 6 |
| 98 | 124.69 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 115 | 124.93 | temperature | 20.0 | 30 | > th | dose independent | rect. | 1 | 17 |
| 119 | 124.95 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 127 | 125.01 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 136 | 125.12 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 139 | 125.13 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 166 | 125.54 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 171 | 125.59 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 182 | 125.70 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 21 |
| 184 | 125.72 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 187 | 125.76 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 10 |
| 193 | 125.85 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 214 | 126.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 10 |
| 215 | 126.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 220 | 126.14 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 239 | 126.29 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 240 | 126.30 | temperature | 20.0 | 270 | > th | dose independent | rect. | 23 | 17 |
| 248 | 126.38 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 23 |
| 264 | 126.49 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 268 | 126.52 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 279 | 126.60 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 24 | 9 |
| 302 | 126.75 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 12 | 17 |
| 305 | 126.77 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 311 | 126.80 | humidity | 90.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 312 | 126.80 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 5 |
| 317 | 126.83 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 7 |
| 344 | 126.94 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 10 |
| 363 | 127.03 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 10 |
| 370 | 127.08 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 384 | 127.13 | temperature | 20.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 400 | 127.21 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 412 | 127.26 | temperature | 20.0 | 270 | > th | dose independent | sin | 11 | NA |
| 421 | 127.30 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 439 | 127.35 | temperature | 20.0 | 270 | < th | dose independent | rect. | 14 | 18 |
| 447 | 127.39 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 7 |
| 449 | 127.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 453 | 127.39 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 12 | 19 |
| 465 | 127.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 489 | 127.50 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 491 | 127.51 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 492 | 127.51 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 525 | 127.59 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 8 |
| 538 | 127.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 12 |
| 570 | 127.70 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 571 | 127.71 | wind | 1.0 | 43200 | > th | dose independent | rect. | 6 | 6 |
| 574 | 127.71 | humidity | 80.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 587 | 127.75 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 588 | 127.76 | humidity | 90.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 612 | 127.81 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 17 | 13 |
| 666 | 127.93 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 5 |
| 711 | 128.04 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 802 | 128.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 803 | 128.18 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 14 | 18 |
| 836 | 128.25 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 10 |
| 864 | 128.28 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 868 | 128.29 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 10 |
| 886 | 128.32 | temperature | 20.0 | 270 | < th | dose independent | sin | 12 | NA |
| 887 | 128.32 | wind | 1.0 | 43200 | < th | dose independent | rect. | 7 | 5 |
| 942 | 128.38 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 972 | 128.41 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 991 | 128.43 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 1 | 6 |
| 994 | 128.44 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 997 | 128.44 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 22 | 3 |