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Os01g0184800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Phosducin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.8 (0.0172) R2 : 0.455
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.819 (0.0437) R2dC : 0.421 R2C : 0.419
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.174 (0.0363) R2dN8 : 0.0355 R2N8 : 0.033
σ : 0.325
deviance : 48.33
__
_____
C
peak time of C : 3.65
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38.11 0.29 11.8 0.508 0.849 0.372 -0.104 -0.447 0.316 3.42 19.46 1340 -- --
38.54 0.289 11.8 0.479 0.842 0.37 -0.0586 -- 0.301 3.38 19.78 1341 -- --
38.15 0.288 11.8 0.509 0.848 0.374 -- -0.432 0.316 3.41 19.48 1339 -- --
38.45 0.289 11.8 0.485 0.848 0.363 -- -- 0.3 3.47 29.26 1319 -- --
51.53 0.334 11.8 0.524 -- 1.01 -- -0.0205 0.331 -- 34.72 429 -- --
43.23 0.308 11.8 0.436 0.811 -- -0.122 -- 0.222 3.66 -- -- -- --
43.28 0.308 11.8 0.438 0.811 -- -- -- 0.223 3.65 -- -- -- --
42.14 0.302 11.8 0.406 -- 0.81 -- -- 0.368 -- 7.53 453 -- --
44.46 0.311 11.8 -- 0.838 0.364 -- -- 0.302 3.53 29.92 19719 -- --
79.76 0.417 11.8 0.472 -- -- -- -- 0.244 -- -- -- -- --
48.33 0.325 11.8 -- 0.819 -- -- -- 0.174 3.65 -- -- -- --
46.5 0.318 11.8 -- -- 0.851 -- -- 0.353 -- 8.41 457 -- --
85.64 0.432 11.8 -- -- -- -- -- 0.192 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 36.45 radiation 20.0 1440 < th dose independent rect. 11 1
2 36.64 radiation 20.0 4320 > th dose dependent rect. 6 2
17 36.70 radiation 30.0 4320 < th dose independent rect. 6 2
18 36.70 radiation 30.0 4320 < th dose independent rect. 21 11
23 36.75 radiation 30.0 4320 < th dose independent rect. 17 15
26 36.78 radiation 30.0 4320 < th dose independent rect. 24 8
28 36.79 radiation 30.0 4320 < th dose independent rect. 2 6
32 36.92 radiation 30.0 4320 > th dose independent rect. 16 16
33 36.93 radiation 30.0 4320 > th dose independent rect. 7 1
62 37.03 radiation 1.0 1440 < th dose independent rect. 13 1
63 37.03 radiation 1.0 1440 < th dose dependent rect. 13 1
65 37.13 radiation 40.0 1440 < th dose dependent rect. 11 1
66 37.19 radiation 1.0 1440 < th dose independent rect. 11 3
67 37.19 radiation 1.0 1440 < th dose dependent rect. 11 3
72 37.24 radiation 20.0 1440 < th dose dependent rect. 11 1
90 37.43 temperature 10.0 1440 > th dose dependent rect. 18 1
91 37.43 radiation 10.0 1440 > th dose dependent rect. 11 1
106 37.48 wind 1.0 43200 < th dose independent rect. 2 2
109 37.53 wind 1.0 43200 > th dose independent rect. 2 2
112 37.54 radiation 20.0 1440 < th dose independent rect. 7 6
113 37.55 radiation 30.0 1440 < th dose independent rect. 8 4
119 37.59 radiation 30.0 1440 < th dose independent rect. 16 20
120 37.59 radiation 40.0 1440 < th dose dependent rect. 8 4
122 37.60 radiation 1.0 1440 > th dose dependent rect. 8 4
124 37.61 temperature 30.0 1440 < th dose dependent rect. 18 1
132 37.64 radiation 20.0 1440 < th dose independent rect. 2 11
135 37.64 radiation 20.0 1440 < th dose independent rect. 22 15
229 37.75 radiation 10.0 43200 > th dose independent rect. 8 2
288 37.80 radiation 1.0 1440 > th dose independent rect. 13 1
310 37.83 wind 7.0 43200 > th dose independent rect. 2 12
311 37.83 wind 7.0 43200 > th dose independent rect. 23 15
334 37.84 radiation 40.0 1440 < th dose dependent rect. 21 15
338 37.85 wind 7.0 43200 > th dose independent rect. 20 18
342 37.85 radiation 40.0 1440 < th dose dependent rect. 2 10
346 37.85 wind 7.0 43200 > th dose dependent rect. 20 18
348 37.86 wind 7.0 43200 < th dose independent rect. 3 11
350 37.86 wind 7.0 43200 < th dose independent rect. 23 15
361 37.87 wind 7.0 43200 < th dose independent rect. 20 18
404 37.93 wind 7.0 43200 > th dose independent sin 6 NA
423 37.95 wind 7.0 43200 < th dose independent sin 6 NA
424 37.95 radiation 30.0 1440 < th dose independent sin 8 NA
434 37.95 temperature 10.0 1440 > th dose dependent rect. 7 15
441 37.96 temperature 20.0 43200 > th dose independent rect. 9 13
445 37.97 temperature 20.0 1440 > th dose independent rect. 21 1
452 37.97 wind 7.0 43200 > th dose dependent rect. 3 11
457 37.98 temperature 20.0 43200 > th dose independent rect. 16 6
465 37.98 temperature 15.0 1440 > th dose dependent rect. 7 3
486 37.99 precipitation 0.1 43200 > th dose dependent rect. 14 10
489 37.99 wind 7.0 43200 > th dose dependent rect. 23 15
497 38.00 temperature 20.0 1440 > th dose independent rect. 12 13
499 38.00 radiation 10.0 1440 > th dose dependent sin 8 NA
521 38.01 radiation 30.0 1440 > th dose independent rect. 11 1
523 38.01 temperature 20.0 43200 < th dose independent rect. 16 6
533 38.01 temperature 30.0 1440 < th dose dependent rect. 7 3
534 38.01 precipitation 0.1 43200 > th dose dependent rect. 19 4
544 38.02 radiation 30.0 1440 > th dose independent rect. 9 3
563 38.02 temperature 30.0 1440 < th dose dependent rect. 8 1
566 38.02 precipitation 0.1 43200 > th dose dependent rect. 17 6
580 38.03 temperature 20.0 43200 < th dose independent rect. 10 12
590 38.03 wind 9.0 43200 < th dose independent rect. 17 20
592 38.03 wind 9.0 43200 > th dose dependent rect. 11 1
619 38.04 temperature 20.0 43200 < th dose independent rect. 18 1
625 38.04 temperature 20.0 1440 < th dose independent rect. 12 13
629 38.04 temperature 20.0 14400 > th dose independent rect. 12 16
633 38.04 wind 5.0 43200 > th dose dependent sin 5 NA
668 38.05 temperature 20.0 43200 > th dose independent rect. 20 1
669 38.05 temperature 20.0 1440 < th dose independent rect. 21 1
670 38.05 temperature 20.0 43200 < th dose independent rect. 21 1
757 38.07 temperature 20.0 14400 > th dose independent sin 15 NA
778 38.07 radiation 40.0 43200 < th dose dependent rect. 3 2
788 38.07 precipitation 0.1 43200 > th dose dependent rect. 8 14
800 38.08 humidity 90.0 14400 > th dose independent rect. 21 3
811 38.08 humidity 90.0 14400 > th dose dependent rect. 4 4
876 38.09 wind 7.0 43200 > th dose dependent rect. 9 4
891 38.10 wind 9.0 43200 < th dose independent rect. 9 4
898 38.10 temperature 20.0 14400 < th dose independent rect. 13 15
912 38.10 humidity 90.0 43200 > th dose dependent rect. 10 1
942 38.11 wind 7.0 43200 > th dose dependent rect. 8 6
956 38.12 temperature 20.0 14400 < th dose independent sin 15 NA
993 38.13 wind 9.0 43200 < th dose independent rect. 11 1
994 38.13 wind 9.0 43200 > th dose independent rect. 10 2