Os01g0183600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os01g0183600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.61 | 0.563 | 8.01 | -1.38 | 1.2 | 1.48 | 1.02 | -2.86 | -0.215 | 21.4 | 21.33 | 1278 | -- | -- |
| 149.05 | 0.569 | 7.92 | -0.592 | 1.2 | 1.41 | 0.915 | -- | -0.00673 | 21.4 | 19.2 | 1286 | -- | -- |
| 147.13 | 0.565 | 8.01 | -1.46 | 1.21 | 1.49 | -- | -3.02 | -0.222 | 21.3 | 22.04 | 1296 | -- | -- |
| 151.68 | 0.574 | 7.92 | -0.633 | 1.19 | 1.41 | -- | -- | -0.00493 | 21.3 | 19.23 | 1251 | -- | -- |
| 221.54 | 0.693 | 7.98 | -1.45 | -- | 1.73 | -- | -2.7 | -0.235 | -- | 21.73 | 2154 | -- | -- |
| 201.62 | 0.666 | 7.85 | -0.102 | 1.29 | -- | 0.973 | -- | 0.31 | 21.9 | -- | -- | -- | -- |
| 205.25 | 0.671 | 7.85 | -0.139 | 1.29 | -- | -- | -- | 0.309 | 21.8 | -- | -- | -- | -- |
| 196.86 | 0.653 | 7.93 | -0.73 | -- | 2.06 | -- | -- | -0.156 | -- | 18.7 | 797 | -- | -- |
| 160.54 | 0.59 | 7.89 | -- | 1.2 | 1.16 | -- | -- | 0.109 | 21.3 | 20.72 | 1246 | -- | -- |
| 304.14 | 0.815 | 7.81 | -0.125 | -- | -- | -- | -- | 0.308 | -- | -- | -- | -- | -- |
| 205.76 | 0.671 | 7.84 | -- | 1.29 | -- | -- | -- | 0.324 | 21.8 | -- | -- | -- | -- |
| 209.4 | 0.674 | 7.87 | -- | -- | 1.91 | -- | -- | 0.0312 | -- | 18.98 | 792 | -- | -- |
| 304.56 | 0.815 | 7.81 | -- | -- | -- | -- | -- | 0.322 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.95 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 8 | 141.16 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 12 | 141.60 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 17 |
| 14 | 141.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 17 |
| 23 | 142.09 | temperature | 30 | 720 | < th | dose dependent | sin | 13 | NA |
| 25 | 142.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 48 | 143.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 4 |
| 51 | 143.27 | temperature | 15 | 720 | > th | dose dependent | sin | 13 | NA |
| 61 | 143.52 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 108 | 144.48 | temperature | 15 | 270 | > th | dose dependent | rect. | 23 | 10 |
| 143 | 144.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 166 | 145.04 | temperature | 20 | 270 | > th | dose independent | rect. | 13 | 20 |
| 202 | 145.42 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 20 |
| 214 | 145.54 | wind | 7 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 215 | 145.57 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 243 | 145.83 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 11 |
| 261 | 145.95 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 21 |
| 283 | 146.06 | wind | 7 | 43200 | > th | dose dependent | sin | 22 | NA |
| 285 | 146.07 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 303 | 146.13 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 19 |
| 312 | 146.17 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 320 | 146.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 321 | 146.19 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 14 |
| 329 | 146.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 332 | 146.23 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 20 |
| 350 | 146.32 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 16 |
| 351 | 146.32 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 354 | 146.32 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 371 | 146.36 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 14 |
| 376 | 146.38 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 388 | 146.43 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 17 |
| 410 | 146.52 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 451 | 146.66 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 16 |
| 459 | 146.69 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 14 |
| 470 | 146.71 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 18 |
| 519 | 146.84 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 531 | 146.88 | wind | 3 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 533 | 146.89 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 17 |
| 593 | 147.06 | wind | 5 | 43200 | < th | dose independent | sin | 17 | NA |
| 703 | 147.40 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 847 | 147.80 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 937 | 147.99 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 954 | 148.01 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 14 |