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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0183500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cytochrome P450 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.88 (0.0137) R2 : 0.0697
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.168 (0.0288) R2dN8 : 0.09 R2N8 : 0.0697
σ : 0.257
deviance : 30.39
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.75 0.248 2.86 0.122 0.0837 -0.241 0.018 0.706 0.283 14.8 10.81 4425 -- --
27.95 0.246 2.85 0.0659 0.0854 -0.288 0.0471 -- 0.278 14.7 10.8 4500 -- --
27.75 0.245 2.86 0.123 0.0835 -0.24 -- 0.716 0.283 14.8 10.8 4428 -- --
27.96 0.246 2.85 0.0657 0.0857 -0.287 -- -- 0.278 14.8 10.8 4500 -- --
28.13 0.247 2.86 0.123 -- -0.209 -- 0.741 0.271 -- 10.8 4470 -- --
29.94 0.257 2.88 0.0695 0.0692 -- -0.151 -- 0.178 19.3 -- -- -- --
29.99 0.256 2.88 0.0733 0.071 -- -- -- 0.178 18.6 -- -- -- --
28.35 0.248 2.85 0.0635 -- -0.257 -- -- 0.266 -- 10.8 4481 -- --
28.07 0.247 2.85 -- 0.0844 -0.289 -- -- 0.272 14.8 10.79 4500 -- --
30.26 0.257 2.87 0.0716 -- -- -- -- 0.176 -- -- -- -- --
30.14 0.257 2.88 -- 0.0701 -- -- -- 0.169 18.6 -- -- -- --
28.46 0.248 2.86 -- -- -0.258 -- -- 0.258 -- 10.75 4442 -- --
30.39 0.257 2.88 -- -- -- -- -- 0.168 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.83 atmosphere 1000.0 10 < th dose independent rect. 7 1
8 26.83 atmosphere 1000.0 10 < th dose dependent rect. 7 1
15 26.84 wind 1.0 10 < th dose independent rect. 7 1
16 26.84 humidity 70.0 10 < th dose independent rect. 7 1
77 26.84 wind 1.0 10 < th dose dependent rect. 7 1
78 26.84 humidity 70.0 10 < th dose dependent rect. 7 1
149 27.70 atmosphere 1005.0 30 > th dose dependent rect. 18 1
150 27.71 atmosphere 1005.0 30 > th dose dependent rect. 16 3
151 27.72 temperature 30.0 30 < th dose independent rect. 18 1
152 27.72 humidity 70.0 30 > th dose independent rect. 18 1
154 27.76 atmosphere 1005.0 30 > th dose dependent rect. 16 1
155 27.77 humidity 60.0 30 > th dose independent rect. 16 1
156 27.77 atmosphere 1005.0 30 > th dose independent rect. 16 1
157 27.77 wind 5.0 30 > th dose dependent rect. 16 1
159 27.78 humidity 70.0 30 > th dose dependent rect. 18 1
160 27.79 radiation 10.0 270 > th dose dependent rect. 16 1
161 27.80 temperature 30.0 30 < th dose independent rect. 16 1
177 27.82 wind 5.0 30 > th dose independent rect. 16 1
178 27.82 radiation 10.0 270 > th dose independent rect. 16 1
181 27.84 humidity 50.0 30 > th dose dependent rect. 16 1
213 27.89 wind 9.0 30 < th dose independent rect. 17 23
214 27.89 temperature 30.0 30 < th dose dependent rect. 18 1
219 27.93 temperature 25.0 10 > th dose independent rect. 16 13
228 27.97 radiation 30.0 30 > th dose independent rect. 7 1
229 27.97 radiation 10.0 10 < th dose independent rect. 16 1
246 27.97 radiation 20.0 30 < th dose dependent rect. 16 1
270 28.04 temperature 25.0 30 > th dose independent rect. 16 1
271 28.04 humidity 80.0 30 < th dose independent rect. 16 1
272 28.04 radiation 1.0 30 > th dose independent rect. 16 1
293 28.05 atmosphere 995.0 30 > th dose independent rect. 16 1
315 28.06 wind 9.0 30 < th dose independent rect. 16 1
316 28.06 temperature 10.0 30 > th dose independent rect. 16 1
320 28.06 atmosphere 1010.0 30 < th dose independent rect. 16 1
324 28.06 precipitation 0.1 30 < th dose independent rect. 16 1
340 28.06 temperature 10.0 30 > th dose independent rect. 17 23
341 28.06 precipitation 0.1 30 < th dose dependent rect. 16 1
350 28.11 temperature 10.0 1440 > th dose independent rect. 17 1
354 28.11 radiation 30.0 1440 < th dose independent rect. 17 1
360 28.11 temperature 10.0 1440 > th dose independent rect. 18 23
363 28.11 temperature 10.0 30 > th dose dependent rect. 16 1
368 28.13 radiation 1.0 30 > th dose dependent rect. 16 1
372 28.15 atmosphere 1015.0 30 < th dose dependent rect. 16 1
379 28.17 atmosphere 1005.0 30 > th dose independent rect. 16 3
380 28.17 temperature 30.0 30 < th dose dependent rect. 16 1
386 28.18 wind 9.0 30 < th dose dependent rect. 16 1
411 28.21 humidity 90.0 30 < th dose dependent rect. 16 1
517 28.33 precipitation 0.1 30 < th dose independent rect. 17 23
520 28.33 precipitation 0.1 30 < th dose dependent rect. 17 23
525 28.35 temperature 25.0 30 > th dose independent rect. 16 3
546 28.37 temperature 15.0 10 > th dose dependent rect. 6 10
563 28.39 radiation 20.0 30 > th dose dependent rect. 7 1
581 28.40 atmosphere 995.0 30 > th dose independent rect. 17 23
587 28.40 temperature 15.0 10 > th dose dependent rect. 2 14
589 28.41 wind 9.0 4320 > th dose dependent rect. 13 1
593 28.42 wind 9.0 4320 > th dose independent rect. 15 1
598 28.43 wind 9.0 4320 > th dose independent rect. 13 3
601 28.45 wind 9.0 4320 > th dose independent rect. 13 1
604 28.46 wind 9.0 4320 < th dose independent rect. 13 1
622 28.48 wind 9.0 4320 > th dose dependent rect. 13 3
623 28.49 wind 7.0 10 < th dose independent rect. 19 23
627 28.49 temperature 25.0 30 > th dose dependent rect. 16 3
628 28.49 temperature 25.0 30 > th dose dependent rect. 16 13
631 28.50 wind 9.0 4320 < th dose independent rect. 13 3
655 28.52 wind 3.0 30 > th dose dependent rect. 18 1
687 28.53 wind 7.0 30 < th dose independent rect. 19 21
689 28.53 temperature 25.0 30 > th dose dependent rect. 16 9
691 28.54 atmosphere 1000.0 270 < th dose independent rect. 4 1
694 28.54 humidity 80.0 30 < th dose independent rect. 16 3
698 28.54 atmosphere 1000.0 270 < th dose dependent rect. 4 1
703 28.54 temperature 10.0 30 > th dose dependent rect. 19 21
728 28.56 wind 9.0 4320 < th dose independent rect. 15 1
733 28.57 temperature 25.0 30 > th dose dependent rect. 6 2
802 28.62 temperature 30.0 30 < th dose independent rect. 16 3
803 28.62 humidity 60.0 30 > th dose independent rect. 16 3
805 28.62 wind 1.0 10 > th dose independent rect. 16 13
817 28.62 wind 9.0 10 < th dose dependent rect. 19 23
829 28.64 radiation 1.0 30 < th dose dependent rect. 18 1
843 28.65 temperature 15.0 10 > th dose dependent rect. 8 8
869 28.68 temperature 25.0 90 > th dose independent rect. 6 1
871 28.68 wind 7.0 4320 > th dose dependent rect. 15 1
891 28.70 radiation 1.0 30 < th dose independent rect. 18 1
892 28.70 temperature 25.0 10 > th dose independent rect. 16 9
901 28.70 wind 1.0 10 > th dose dependent rect. 16 20
905 28.71 humidity 90.0 10 < th dose independent rect. 6 10
914 28.71 wind 9.0 10 < th dose dependent rect. 19 21
939 28.74 wind 3.0 30 > th dose independent rect. 18 1
969 28.75 temperature 25.0 90 > th dose independent rect. 4 4
971 28.75 wind 7.0 10 < th dose independent rect. 6 10