Os01g0181200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0181200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.3 | 0.558 | 3.27 | 0.509 | 0.575 | 0.569 | 1.5 | -0.447 | 0.146 | 7.4 | 22.62 | 593 | -- | -- |
| 141.47 | 0.554 | 3.27 | 0.467 | 0.568 | 0.676 | 1.44 | -- | 0.143 | 7.38 | 22.39 | 560 | -- | -- |
| 146.82 | 0.564 | 3.28 | 0.537 | 0.597 | 0.799 | -- | 0.171 | 0.149 | 7.22 | 21.84 | 462 | -- | -- |
| 146.77 | 0.564 | 3.28 | 0.495 | 0.578 | 0.725 | -- | -- | 0.127 | 7.45 | 21.8 | 463 | -- | -- |
| 159.8 | 0.589 | 3.28 | 0.512 | -- | 0.903 | -- | 0.222 | 0.18 | -- | 33.45 | 518 | -- | -- |
| 146.39 | 0.567 | 3.3 | 0.3 | 0.625 | -- | 1.37 | -- | 0.0443 | 7.47 | -- | -- | -- | -- |
| 151.59 | 0.577 | 3.3 | 0.332 | 0.627 | -- | -- | -- | 0.042 | 7.47 | -- | -- | -- | -- |
| 159.85 | 0.589 | 3.28 | 0.546 | -- | 0.91 | -- | -- | 0.183 | -- | 40.18 | 519 | -- | -- |
| 152.39 | 0.575 | 3.3 | -- | 0.598 | 0.409 | -- | -- | 0.0525 | 7.37 | 22.5 | 535 | -- | -- |
| 172.56 | 0.614 | 3.31 | 0.342 | -- | -- | -- | -- | 0.0519 | -- | -- | -- | -- | -- |
| 154.5 | 0.581 | 3.3 | -- | 0.63 | -- | -- | -- | 0.00497 | 7.43 | -- | -- | -- | -- |
| 167.04 | 0.602 | 3.3 | -- | -- | 0.722 | -- | -- | 0.0996 | -- | 36.86 | 476 | -- | -- |
| 175.64 | 0.619 | 3.32 | -- | -- | -- | -- | -- | 0.014 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.23 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 15 | 5 |
| 7 | 133.41 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 15 | 6 |
| 9 | 133.41 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 14 | 3 |
| 13 | 133.43 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 15 | 6 |
| 47 | 133.69 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 15 | 1 |
| 104 | 135.37 | temperature | 30 | 90 | < th | dose dependent | rect. | 2 | 10 |
| 109 | 135.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 112 | 135.59 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 6 |
| 113 | 135.62 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 117 | 135.71 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 3 |
| 121 | 135.83 | temperature | 25 | 10 | > th | dose dependent | sin | 6 | NA |
| 124 | 135.94 | temperature | 25 | 90 | > th | dose dependent | sin | 7 | NA |
| 126 | 135.99 | humidity | 90 | 720 | < th | dose independent | rect. | 6 | 1 |
| 136 | 136.19 | wind | 9 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 152 | 136.58 | temperature | 15 | 30 | > th | dose dependent | rect. | 6 | 8 |
| 183 | 137.25 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 5 |
| 184 | 137.26 | temperature | 10 | 90 | > th | dose dependent | sin | 5 | NA |
| 194 | 137.42 | temperature | 30 | 90 | < th | dose dependent | sin | 4 | NA |
| 196 | 137.46 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 20 |
| 201 | 137.52 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 252 | 137.81 | temperature | 25 | 90 | > th | dose dependent | rect. | 21 | 16 |
| 253 | 137.82 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 13 |
| 256 | 137.83 | wind | 9 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 276 | 137.92 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 16 |
| 308 | 138.05 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 319 | 138.08 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 321 | 138.09 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 385 | 138.46 | atmosphere | 1000 | 270 | < th | dose independent | rect. | 12 | 4 |
| 397 | 138.51 | radiation | 10 | 270 | > th | dose independent | rect. | 6 | 1 |
| 417 | 138.54 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 10 |
| 430 | 138.57 | temperature | 25 | 10 | > th | dose dependent | rect. | 22 | 13 |
| 447 | 138.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 451 | 138.71 | wind | 7 | 10 | < th | dose independent | rect. | 6 | 8 |
| 479 | 138.80 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 510 | 138.90 | radiation | 1 | 720 | < th | dose dependent | rect. | 24 | 13 |
| 572 | 139.07 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 18 |
| 592 | 139.16 | wind | 7 | 10 | < th | dose independent | rect. | 6 | 20 |
| 615 | 139.22 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 2 | 4 |
| 619 | 139.23 | wind | 1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 626 | 139.25 | temperature | 10 | 30 | > th | dose dependent | rect. | 6 | 22 |
| 631 | 139.27 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 635 | 139.28 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 651 | 139.32 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 10 |
| 652 | 139.32 | temperature | 25 | 90 | < th | dose independent | rect. | 2 | 10 |
| 653 | 139.32 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 17 |
| 686 | 139.42 | radiation | 1 | 720 | < th | dose dependent | sin | 7 | NA |
| 691 | 139.43 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 11 | 19 |
| 706 | 139.45 | temperature | 30 | 30 | < th | dose dependent | rect. | 2 | 19 |
| 707 | 139.45 | atmosphere | 995 | 30 | > th | dose dependent | rect. | 11 | 19 |
| 708 | 139.46 | humidity | 90 | 270 | < th | dose independent | rect. | 6 | 8 |
| 728 | 139.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 741 | 139.51 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 758 | 139.55 | radiation | 10 | 30 | > th | dose independent | rect. | 6 | 5 |
| 774 | 139.56 | humidity | 90 | 270 | < th | dose dependent | rect. | 6 | 2 |
| 850 | 139.70 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 864 | 139.72 | wind | 1 | 90 | < th | dose independent | rect. | 14 | 1 |
| 871 | 139.73 | wind | 9 | 30 | < th | dose independent | rect. | 3 | 23 |
| 875 | 139.74 | humidity | 90 | 30 | > th | dose independent | rect. | 2 | 1 |
| 881 | 139.75 | temperature | 15 | 270 | > th | dose independent | rect. | 3 | 23 |
| 891 | 139.76 | radiation | 1 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 896 | 139.77 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 1 |
| 917 | 139.82 | temperature | 15 | 720 | > th | dose independent | rect. | 3 | 15 |
| 920 | 139.83 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 1 |
| 921 | 139.83 | humidity | 80 | 90 | > th | dose independent | rect. | 2 | 10 |
| 951 | 139.86 | humidity | 80 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 952 | 139.86 | radiation | 1 | 720 | > th | dose dependent | rect. | 4 | 1 |
| 970 | 139.87 | radiation | 20 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 991 | 139.90 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 24 | 6 |
| 998 | 139.91 | humidity | 90 | 270 | > th | dose independent | rect. | 7 | 5 |