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Os01g0180800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Heat shock protein Hsp70 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.2 (0.0229) R2 : 0.566
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.31 (0.0546) R2dC : 0.552 R2C : 0.544
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.203 (0.0483) R2dN8 : 0.0217 R2N8 : 0.0133
σ : 0.433
deviance : 85.5
__
_____
C
peak time of C : 11.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.01 0.355 13.2 0.455 0.21 -1.02 -0.326 -1.15 0.224 9.86 12.7 10 -- --
57.96 0.357 13.2 0.429 0.244 -0.986 0.969 -- 0.235 11.8 12.7 10 -- --
57.08 0.355 13.2 0.442 0.252 -0.98 -- -0.911 0.236 11 12.7 10 -- --
61.91 0.369 13.2 0.466 0.228 -1 -- -- 0.238 11 12.7 10 -- --
57.92 0.356 13.2 0.439 -- -1.16 -- -0.895 0.233 -- 12.7 10 -- --
74.63 0.405 13.2 0.441 1.32 -- 1.04 -- 0.252 11.7 -- -- -- --
79.35 0.417 13.2 0.483 1.32 -- -- -- 0.256 11.6 -- -- -- --
62.55 0.368 13.2 0.477 -- -1.17 -- -- 0.225 -- 12.46 10 -- --
67.62 0.385 13.2 -- 0.211 -1.01 -- -- 0.186 10.8 12.7 10 -- --
188.6 0.642 13.2 0.446 -- -- -- -- 0.241 -- -- -- -- --
85.5 0.433 13.2 -- 1.31 -- -- -- 0.203 11.6 -- -- -- --
68.24 0.386 13.2 -- -- -1.17 -- -- 0.184 -- 12.7 10 -- --
193.85 0.65 13.2 -- -- -- -- -- 0.192 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.27 radiation 10.0 90 < th dose dependent sin 3 NA
5 53.44 radiation 10.0 90 < th dose dependent rect. 2 13
10 54.00 radiation 10.0 90 < th dose dependent rect. 2 17
30 55.37 radiation 20.0 10 < th dose dependent rect. 2 13
32 55.42 radiation 10.0 10 < th dose dependent rect. 2 18
36 55.59 radiation 1.0 90 < th dose independent sin 2 NA
37 55.62 radiation 1.0 90 > th dose independent sin 2 NA
73 56.36 radiation 20.0 10 < th dose dependent rect. 13 19
91 56.68 radiation 10.0 90 < th dose dependent rect. 23 22
97 56.79 radiation 1.0 90 < th dose independent rect. 2 17
111 57.06 radiation 10.0 90 < th dose independent rect. 2 13
112 57.07 wind 1.0 270 > th dose independent rect. 9 10
116 57.10 temperature 10.0 10 > th dose dependent rect. 6 20
124 57.19 radiation 10.0 90 < th dose dependent rect. 21 23
134 57.30 radiation 1.0 270 < th dose independent rect. 23 15
139 57.32 temperature 30.0 10 < th dose dependent rect. 2 13
162 57.46 radiation 10.0 90 < th dose dependent rect. 17 23
187 57.63 radiation 20.0 10 < th dose dependent rect. 2 8
201 57.68 humidity 70.0 10 > th dose dependent rect. 2 14
212 57.74 temperature 10.0 90 > th dose dependent rect. 20 15
213 57.74 radiation 20.0 10 < th dose dependent rect. 13 17
218 57.76 radiation 10.0 10 < th dose dependent rect. 10 23
256 57.96 radiation 1.0 270 > th dose independent sin 6 NA
272 58.01 radiation 10.0 10 < th dose dependent rect. 23 23
273 58.02 humidity 80.0 10 > th dose independent rect. 2 14
280 58.03 radiation 10.0 90 < th dose dependent rect. 9 23
283 58.04 radiation 10.0 90 < th dose dependent rect. 12 23
287 58.06 radiation 1.0 270 < th dose independent sin 6 NA
288 58.06 radiation 10.0 10 < th dose dependent no NA NA
313 58.14 radiation 10.0 90 < th dose dependent no NA NA
320 58.16 wind 5.0 270 < th dose independent rect. 24 5
324 58.16 radiation 10.0 90 < th dose dependent rect. 15 23
346 58.21 radiation 10.0 10 < th dose dependent rect. 15 23
356 58.25 radiation 20.0 90 < th dose dependent rect. 7 23
376 58.33 wind 5.0 270 < th dose independent rect. 1 3
403 58.45 radiation 10.0 10 < th dose independent rect. 2 18
407 58.46 wind 9.0 270 < th dose independent rect. 9 10
428 58.53 radiation 10.0 10 < th dose independent rect. 2 13
438 58.56 wind 1.0 270 > th dose independent rect. 24 5
439 58.56 temperature 10.0 270 > th dose independent rect. 9 10
440 58.56 atmosphere 1015.0 270 < th dose independent rect. 9 10
441 58.56 temperature 10.0 270 > th dose independent rect. 19 14
442 58.56 humidity 50.0 270 > th dose independent rect. 19 14
443 58.56 atmosphere 995.0 270 > th dose independent rect. 19 14
462 58.62 atmosphere 1015.0 270 < th dose independent rect. 5 19
465 58.64 humidity 90.0 10 < th dose independent rect. 6 10
482 58.68 radiation 1.0 90 < th dose independent rect. 2 6
509 58.74 wind 9.0 270 < th dose independent rect. 19 14
551 58.88 humidity 50.0 10 > th dose dependent rect. 2 18
585 59.02 temperature 15.0 270 > th dose independent rect. 5 19
621 59.11 temperature 30.0 270 < th dose independent rect. 19 14
623 59.11 temperature 15.0 270 > th dose independent rect. 4 21
633 59.13 wind 7.0 270 < th dose independent rect. 15 14
656 59.19 temperature 30.0 10 < th dose dependent rect. 2 6
666 59.23 temperature 10.0 270 > th dose independent rect. 1 3
668 59.23 temperature 30.0 270 < th dose independent rect. 1 3
669 59.23 humidity 50.0 270 > th dose independent rect. 1 3
672 59.23 atmosphere 995.0 270 > th dose independent rect. 1 3
673 59.23 atmosphere 1010.0 270 < th dose independent rect. 1 3
675 59.23 radiation 1.0 270 < th dose independent rect. 1 3
682 59.23 radiation 1.0 270 < th dose dependent rect. 1 3
699 59.27 radiation 1.0 270 < th dose independent rect. 23 20
708 59.29 wind 5.0 270 < th dose independent rect. 2 1
720 59.32 temperature 10.0 270 > th dose independent rect. 24 5
722 59.32 temperature 30.0 270 < th dose independent rect. 24 5
723 59.32 humidity 50.0 270 > th dose independent rect. 24 5
726 59.32 atmosphere 995.0 270 > th dose independent rect. 24 5
727 59.32 radiation 20.0 270 < th dose independent rect. 24 5
733 59.33 precipitation 0.1 90 < th dose independent rect. 2 4
735 59.33 precipitation 0.1 90 < th dose dependent rect. 2 4
742 59.34 atmosphere 1010.0 270 < th dose independent rect. 24 5
755 59.39 humidity 90.0 10 < th dose independent rect. 6 8
756 59.39 precipitation 0.1 270 < th dose independent rect. 9 10
761 59.39 precipitation 0.1 270 < th dose dependent rect. 9 10
773 59.43 wind 9.0 270 < th dose dependent rect. 1 3
795 59.50 radiation 10.0 10 < th dose independent rect. 2 7
815 59.55 precipitation 0.1 270 < th dose independent rect. 24 5
820 59.55 precipitation 0.1 270 < th dose dependent rect. 24 5
874 59.62 atmosphere 995.0 90 > th dose dependent rect. 2 4
894 59.67 wind 9.0 270 < th dose independent rect. 5 19
902 59.68 radiation 10.0 10 < th dose dependent rect. 1 23
906 59.69 radiation 20.0 90 < th dose independent rect. 12 18
907 59.69 wind 9.0 270 < th dose independent rect. 4 21
933 59.71 temperature 15.0 270 > th dose independent rect. 5 10
939 59.72 wind 9.0 270 < th dose dependent rect. 5 10
948 59.75 radiation 10.0 90 < th dose independent rect. 23 22
963 59.78 atmosphere 1015.0 1440 < th dose independent rect. 3 4
972 59.80 precipitation 0.1 270 < th dose independent rect. 15 14
975 59.80 precipitation 0.1 270 < th dose dependent rect. 15 14
982 59.81 radiation 10.0 90 < th dose dependent rect. 1 23
984 59.82 radiation 1.0 90 > th dose independent rect. 6 11
990 59.83 radiation 40.0 10 < th dose dependent rect. 2 4