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Os01g0180600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to MutS homolog 7 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.6 (0.0157) R2 : 0.405
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.713 (0.0407) R2dC : 0.402 R2C : 0.396
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.079 (0.0331) R2dN8 : 0.00963 R2N8 : 0.00379
σ : 0.296
deviance : 40.13
__
_____
C
peak time of C : 16.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.27 0.245 9.6 0.576 0.537 0.296 -0.294 -0.32 0.119 17.8 10.1 251 -- --
27.53 0.244 9.59 0.591 0.561 0.284 -0.423 -- 0.126 17.8 10.05 227 -- --
27.39 0.244 9.6 0.595 0.541 0.308 -- -0.389 0.114 17.9 10.22 229 -- --
27.95 0.246 9.59 0.588 0.555 0.284 -- -- 0.124 17.9 10.1 225 -- --
31.03 0.259 9.6 0.778 -- 0.761 -- -0.595 0.154 -- 2.231 577 -- --
29.05 0.253 9.59 0.636 0.727 -- -0.442 -- 0.152 16.6 -- -- -- --
29.57 0.255 9.59 0.633 0.725 -- -- -- 0.15 16.6 -- -- -- --
30.04 0.255 9.58 0.613 -- 0.755 -- -- 0.136 -- 0.1999 607 -- --
37.08 0.284 9.59 -- 0.554 0.337 -- -- 0.0916 18.2 10.1 230 -- --
57.49 0.354 9.58 0.605 -- -- -- -- 0.131 -- -- -- -- --
40.13 0.296 9.6 -- 0.713 -- -- -- 0.079 16.7 -- -- -- --
38.44 0.289 9.61 -- -- 0.799 -- -- 0.0234 -- 0.17 607 -- --
67.15 0.382 9.6 -- -- -- -- -- 0.0634 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.75 temperature 30.0 90 < th dose dependent rect. 15 6
2 25.75 radiation 30.0 270 < th dose dependent rect. 13 18
3 25.78 radiation 20.0 270 < th dose independent rect. 13 17
5 25.81 temperature 30.0 90 < th dose dependent rect. 13 8
40 26.15 wind 1.0 4320 > th dose independent rect. 17 2
42 26.15 temperature 10.0 90 > th dose dependent rect. 21 7
44 26.16 temperature 15.0 30 > th dose dependent rect. 23 5
46 26.17 wind 9.0 14400 > th dose independent rect. 10 1
52 26.20 wind 9.0 14400 < th dose independent rect. 10 1
54 26.20 temperature 30.0 10 < th dose dependent rect. 14 9
55 26.20 precipitation 0.1 14400 > th dose dependent rect. 3 13
69 26.24 precipitation 0.1 14400 > th dose dependent rect. 3 11
71 26.25 wind 3.0 43200 < th dose dependent rect. 4 3
78 26.26 temperature 10.0 90 > th dose dependent rect. 7 21
80 26.27 wind 3.0 43200 < th dose dependent rect. 23 8
93 26.30 temperature 15.0 90 > th dose independent rect. 21 7
94 26.30 temperature 25.0 90 < th dose independent rect. 13 8
95 26.30 radiation 10.0 10 < th dose independent rect. 4 19
97 26.31 wind 1.0 4320 < th dose independent rect. 17 2
98 26.31 temperature 30.0 270 < th dose dependent rect. 17 1
108 26.33 temperature 10.0 270 > th dose dependent rect. 7 18
114 26.34 radiation 40.0 270 < th dose dependent rect. 12 8
116 26.35 precipitation 0.1 14400 > th dose independent rect. 3 14
117 26.35 precipitation 0.1 14400 < th dose independent rect. 3 14
121 26.35 precipitation 0.1 14400 < th dose dependent rect. 3 14
124 26.36 radiation 20.0 270 < th dose dependent rect. 13 5
130 26.37 radiation 20.0 270 < th dose independent rect. 13 7
136 26.37 radiation 20.0 270 < th dose dependent rect. 2 16
138 26.38 temperature 15.0 90 > th dose independent rect. 4 17
139 26.38 temperature 25.0 90 < th dose independent rect. 4 17
140 26.38 precipitation 0.1 4320 > th dose dependent rect. 2 3
143 26.38 precipitation 0.1 4320 > th dose dependent rect. 23 6
145 26.38 precipitation 0.1 4320 > th dose dependent rect. 22 8
146 26.38 precipitation 0.1 4320 > th dose dependent rect. 22 10
148 26.38 precipitation 0.1 4320 > th dose dependent rect. 22 18
150 26.39 wind 7.0 14400 > th dose dependent rect. 10 1
151 26.39 temperature 15.0 270 > th dose dependent rect. 23 1
152 26.39 precipitation 0.1 14400 > th dose dependent rect. 3 1
158 26.39 humidity 50.0 90 > th dose dependent rect. 13 8
160 26.39 wind 1.0 43200 < th dose dependent rect. 1 10
162 26.39 radiation 20.0 270 < th dose dependent rect. 2 18
174 26.40 precipitation 0.1 4320 > th dose dependent rect. 22 16
176 26.40 radiation 20.0 270 < th dose dependent rect. 1 20
178 26.41 precipitation 0.1 4320 > th dose independent rect. 3 2
179 26.41 wind 1.0 43200 > th dose independent rect. 3 9
180 26.41 wind 1.0 43200 > th dose independent rect. 1 11
181 26.41 wind 1.0 43200 < th dose independent rect. 1 11
196 26.42 precipitation 0.1 4320 < th dose independent rect. 3 2
197 26.42 precipitation 0.1 4320 < th dose dependent rect. 3 2
221 26.44 wind 1.0 43200 < th dose independent rect. 3 9
257 26.46 temperature 10.0 10 > th dose dependent rect. 10 18
266 26.47 precipitation 0.1 4320 > th dose independent rect. 23 17
267 26.47 precipitation 0.1 4320 < th dose independent rect. 23 17
278 26.47 precipitation 0.1 4320 < th dose dependent rect. 23 17
285 26.48 temperature 15.0 270 > th dose independent rect. 23 1
286 26.48 temperature 20.0 30 > th dose independent rect. 23 5
287 26.48 precipitation 0.1 4320 > th dose independent rect. 22 10
291 26.48 precipitation 0.1 4320 > th dose independent rect. 23 15
292 26.48 precipitation 0.1 4320 < th dose independent rect. 23 15
305 26.48 wind 3.0 43200 < th dose dependent rect. 23 13
308 26.48 precipitation 0.1 4320 < th dose dependent rect. 23 15
315 26.49 precipitation 0.1 4320 < th dose independent rect. 22 10
320 26.49 precipitation 0.1 4320 > th dose dependent sin 7 NA
326 26.49 precipitation 0.1 4320 < th dose dependent rect. 22 10
336 26.50 precipitation 0.1 14400 > th dose independent rect. 12 4
337 26.50 precipitation 0.1 14400 < th dose independent rect. 12 4
339 26.50 precipitation 0.1 4320 > th dose independent rect. 23 7
349 26.50 precipitation 0.1 14400 < th dose dependent rect. 12 4
351 26.50 atmosphere 1015.0 90 < th dose dependent rect. 21 6
354 26.50 precipitation 0.1 14400 > th dose dependent rect. 9 7
355 26.50 precipitation 0.1 14400 > th dose dependent rect. 7 9
359 26.50 precipitation 0.1 4320 > th dose dependent rect. 1 13
367 26.51 precipitation 0.1 4320 < th dose independent rect. 23 7
386 26.51 precipitation 0.1 4320 < th dose dependent rect. 23 7
400 26.52 temperature 15.0 270 > th dose independent rect. 21 4
410 26.52 wind 3.0 43200 < th dose dependent sin 7 NA
424 26.52 wind 3.0 43200 < th dose dependent rect. 3 10
439 26.53 humidity 50.0 270 > th dose independent rect. 2 18
440 26.53 precipitation 0.1 14400 > th dose dependent rect. 18 2
447 26.53 wind 3.0 43200 < th dose dependent rect. 4 8
459 26.54 precipitation 0.1 4320 < th dose independent sin 6 NA
469 26.54 precipitation 0.1 4320 < th dose dependent sin 6 NA
488 26.54 radiation 20.0 10 < th dose dependent rect. 4 19
491 26.55 precipitation 0.1 4320 > th dose independent sin 7 NA
499 26.55 wind 1.0 43200 > th dose independent rect. 1 8
509 26.55 atmosphere 1015.0 270 < th dose dependent rect. 21 4
531 26.56 wind 7.0 14400 > th dose independent rect. 12 1
540 26.56 precipitation 0.1 4320 < th dose independent rect. 1 15
547 26.56 atmosphere 1015.0 270 < th dose dependent rect. 23 1
565 26.56 precipitation 0.1 4320 < th dose dependent rect. 1 15
573 26.57 wind 9.0 14400 < th dose independent rect. 12 1
581 26.57 precipitation 0.1 4320 < th dose independent rect. 1 13
594 26.57 precipitation 0.1 14400 > th dose dependent rect. 11 5
609 26.57 precipitation 0.1 4320 < th dose dependent rect. 1 13
624 26.58 temperature 10.0 270 > th dose dependent rect. 21 4
646 26.59 wind 3.0 14400 < th dose independent rect. 22 3
656 26.59 precipitation 0.1 14400 > th dose independent rect. 7 10
657 26.59 precipitation 0.1 14400 < th dose independent rect. 7 10
678 26.59 precipitation 0.1 14400 < th dose dependent rect. 7 10
731 26.61 atmosphere 1010.0 270 < th dose independent rect. 23 1
759 26.62 temperature 25.0 270 < th dose independent rect. 15 3
760 26.62 wind 1.0 43200 < th dose independent rect. 24 4
765 26.62 precipitation 0.1 14400 > th dose independent rect. 9 8
766 26.62 precipitation 0.1 14400 < th dose independent rect. 9 8
782 26.62 precipitation 0.1 14400 < th dose dependent rect. 9 8
803 26.63 humidity 50.0 90 > th dose dependent rect. 15 6
820 26.64 temperature 25.0 10 < th dose independent rect. 14 6
835 26.64 humidity 50.0 90 > th dose independent rect. 4 17
837 26.64 atmosphere 1015.0 30 < th dose dependent rect. 23 5
862 26.65 precipitation 0.1 14400 > th dose independent rect. 19 1
874 26.65 temperature 25.0 270 < th dose independent rect. 1 19
875 26.65 humidity 50.0 270 > th dose independent rect. 1 20
877 26.65 wind 7.0 14400 > th dose dependent rect. 12 1
878 26.65 wind 1.0 43200 < th dose dependent rect. 1 2
897 26.66 wind 3.0 14400 < th dose independent rect. 22 1
898 26.66 precipitation 0.1 14400 < th dose independent rect. 7 1
899 26.66 precipitation 0.1 14400 < th dose independent rect. 19 1
907 26.66 atmosphere 1010.0 90 < th dose independent rect. 21 7
909 26.66 humidity 50.0 270 > th dose independent rect. 13 8
914 26.66 precipitation 0.1 14400 < th dose dependent rect. 7 1
915 26.66 precipitation 0.1 14400 < th dose dependent rect. 19 1
916 26.66 precipitation 0.1 14400 > th dose dependent rect. 14 2
941 26.67 atmosphere 1010.0 30 < th dose independent rect. 23 5
980 26.68 radiation 10.0 270 < th dose independent rect. 2 18
982 26.68 radiation 10.0 10 < th dose dependent sin 22 NA
997 26.68 radiation 10.0 10 < th dose dependent rect. 6 15