Os01g0179000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os01g0179000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 662.43 | 1.21 | 7.01 | 0.0161 | 3.22 | -5.44 | 0.512 | -10.2 | 0.714 | 1.13 | 1.427 | 4320 | 2 | 2.97 |
| 661.7 | 1.2 | 6.74 | -0.105 | 3.15 | -4.84 | 0.547 | -- | 0.831 | 1.01 | 1.689 | 4315 | 2.17 | 2.97 |
| 658.85 | 1.2 | 7.08 | 0.506 | 3.21 | -5.48 | -- | -10.2 | 0.776 | 1.13 | 2.369 | 4319 | 2.07 | 2.94 |
| 660.71 | 1.2 | 6.74 | -0.105 | 3.15 | -4.5 | -- | -- | 0.831 | 0.841 | 1.689 | 4315 | 2.17 | 2.97 |
| 1177.25 | 1.6 | 6.93 | 0.297 | -- | -5.58 | -- | -9.52 | 0.779 | -- | 2.845 | 4313 | 2.05 | 3 |
| 808.01 | 1.33 | 6.9 | -2.25 | 3.24 | -- | 0.385 | -- | 0.146 | 1.13 | -- | -- | -- | -- |
| 808.63 | 1.33 | 6.9 | -2.26 | 3.24 | -- | -- | -- | 0.144 | 1.13 | -- | -- | -- | -- |
| 1171.74 | 1.59 | 6.69 | -0.123 | -- | -4.6 | -- | -- | 0.811 | -- | 1.808 | 4300 | 2.18 | 2.97 |
| 660.44 | 1.2 | 6.74 | -- | 3.09 | -4.4 | -- | -- | 0.857 | 0.926 | 1.945 | 4316 | 2.2 | 2.95 |
| 1458.87 | 1.78 | 6.85 | -2.14 | -- | -- | -- | -- | 0.209 | -- | -- | -- | -- | -- |
| 943.22 | 1.44 | 6.84 | -- | 3.2 | -- | -- | -- | 0.396 | 1.11 | -- | -- | -- | -- |
| 1146.37 | 1.58 | 6.68 | -- | -- | -4.8 | -- | -- | 0.908 | -- | 2.602 | 4303 | 2.02 | 3.22 |
| 1579.22 | 1.85 | 6.79 | -- | -- | -- | -- | -- | 0.446 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 666.47 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 2 | 670.07 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 3 | 670.60 | radiation | 1 | 4320 | < th | dose dependent | rect. | 2 | 3 |
| 4 | 671.52 | radiation | 1 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 6 | 672.71 | radiation | 1 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 8 | 673.91 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 9 | 673.97 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 10 | 674.31 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 11 | 674.74 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 12 | 674.76 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 7 |
| 14 | 674.92 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 17 | 675.15 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 19 | 675.29 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 5 |
| 22 | 675.47 | radiation | 1 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 36 | 676.76 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 70 | 681.29 | wind | 3 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 78 | 681.95 | wind | 3 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 84 | 682.79 | radiation | 1 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 100 | 684.40 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 105 | 684.82 | humidity | 90 | 14400 | > th | dose independent | sin | 11 | NA |
| 122 | 686.30 | humidity | 90 | 14400 | < th | dose independent | sin | 11 | NA |
| 156 | 689.00 | temperature | 20 | 270 | < th | dose independent | rect. | 15 | 17 |
| 163 | 689.33 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 15 |
| 167 | 689.48 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 12 |
| 174 | 689.80 | wind | 5 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 201 | 691.06 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 254 | 693.44 | wind | 1 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 261 | 693.88 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 263 | 693.92 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 279 | 694.70 | humidity | 90 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 283 | 694.81 | wind | 1 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 304 | 695.97 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 2 |
| 313 | 696.25 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 22 |
| 322 | 696.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 359 | 697.33 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 364 | 697.67 | temperature | 20 | 270 | > th | dose independent | rect. | 24 | 22 |
| 366 | 697.73 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 372 | 697.90 | humidity | 80 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 373 | 697.92 | radiation | 40 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 395 | 698.35 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 396 | 698.37 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 6 |
| 397 | 698.38 | humidity | 90 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 398 | 698.39 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 9 |
| 417 | 698.73 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 3 |
| 422 | 698.76 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 427 | 698.84 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 436 | 698.92 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 437 | 698.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 450 | 698.97 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 460 | 699.21 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 464 | 699.32 | radiation | 1 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 467 | 699.36 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 472 | 699.40 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 515 | 700.12 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 544 | 700.75 | temperature | 20 | 720 | < th | dose independent | rect. | 22 | 1 |
| 585 | 701.13 | temperature | 30 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 594 | 701.20 | radiation | 40 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 597 | 701.26 | temperature | 20 | 270 | < th | dose independent | sin | 11 | NA |
| 604 | 701.33 | humidity | 80 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 631 | 701.65 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 643 | 701.78 | temperature | 10 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 707 | 702.46 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 722 | 702.56 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 727 | 702.57 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 729 | 702.59 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 736 | 702.70 | humidity | 90 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 772 | 703.10 | radiation | 1 | 4320 | < th | dose dependent | sin | 9 | NA |
| 780 | 703.16 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 885 | 703.93 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 898 | 703.96 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 6 |
| 980 | 704.33 | temperature | 25 | 43200 | < th | dose independent | rect. | 13 | 2 |