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Os01g0178100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.66 (0.0253) R2 : 0.631
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.82 (0.0663) R2dC : 0.616 R2C : 0.615
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.208 (0.0533) R2dN8 : 0.0159 R2N8 : 0.0145
σ : 0.477
deviance : 104.15
__
_____
C
peak time of C : 5.63
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
87.82 0.44 6.64 -0.275 1.8 0.841 -0.272 0.406 0.226 7.4 20 82 -- --
88.52 0.438 6.64 -0.273 1.81 0.849 -0.435 -- 0.221 7.4 20 79 -- --
87.98 0.437 6.64 -0.283 1.8 0.833 -- 0.484 0.224 7.39 20 79 -- --
89.15 0.44 6.64 -0.294 1.81 0.844 -- -- 0.227 7.41 20 79 -- --
97.85 0.461 6.65 0.016 -- 1.96 -- 0.177 0.28 -- 5.786 710 -- --
101.35 0.472 6.66 -0.326 1.83 -- 0.0896 -- 0.172 5.61 -- -- -- --
101.37 0.471 6.66 -0.325 1.83 -- -- -- 0.171 5.62 -- -- -- --
91.7 0.446 6.68 -0.233 -- 2.26 -- -- 0.285 -- 5.48 699 -- --
91.38 0.445 6.63 -- 1.81 0.866 -- -- 0.261 7.44 20.65 79 -- --
275.33 0.775 6.69 -0.266 -- -- -- -- 0.215 -- -- -- -- --
104.15 0.477 6.66 -- 1.82 -- -- -- 0.208 5.63 -- -- -- --
93.03 0.449 6.67 -- -- 2.25 -- -- 0.312 -- 4.7 696 -- --
277.2 0.777 6.68 -- -- -- -- -- 0.245 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 80.98 temperature 15 720 > th dose dependent rect. 3 2
6 83.25 temperature 20 720 > th dose independent rect. 3 4
9 83.41 temperature 20 720 > th dose independent rect. 3 1
21 84.47 temperature 20 720 > th dose independent rect. 2 11
25 84.64 temperature 20 720 > th dose dependent rect. 7 1
29 84.72 radiation 20 30 < th dose dependent rect. 3 23
30 84.74 temperature 20 720 > th dose dependent rect. 3 7
33 84.87 temperature 20 720 > th dose dependent rect. 6 3
52 85.27 radiation 40 90 < th dose dependent rect. 3 11
76 85.83 temperature 15 720 > th dose dependent rect. 2 11
77 85.86 temperature 15 720 > th dose dependent rect. 1 13
79 85.89 radiation 20 90 < th dose independent rect. 3 12
84 85.94 radiation 40 10 < th dose dependent rect. 3 12
88 85.97 temperature 20 720 > th dose independent sin 6 NA
91 85.99 radiation 40 90 < th dose independent rect. 3 12
131 86.53 radiation 40 10 < th dose independent rect. 3 12
133 86.55 temperature 15 720 > th dose dependent sin 6 NA
158 87.00 radiation 40 270 < th dose independent rect. 1 12
175 87.16 radiation 20 90 < th dose dependent rect. 17 23
191 87.29 humidity 50 30 > th dose dependent rect. 3 23
194 87.32 humidity 60 90 > th dose independent rect. 3 12
220 87.46 atmosphere 1015 720 < th dose independent rect. 10 19
244 87.62 radiation 10 270 < th dose dependent rect. 23 23
246 87.66 radiation 1 10 > th dose dependent rect. 13 23
248 87.70 humidity 50 720 > th dose independent rect. 1 14
258 87.78 radiation 20 90 < th dose dependent rect. 1 23
261 87.79 radiation 20 90 < th dose dependent rect. 3 20
265 87.80 radiation 20 90 < th dose dependent rect. 11 23
278 87.89 radiation 20 90 < th dose dependent rect. 15 23
284 87.94 radiation 20 90 < th dose dependent rect. 7 23
292 88.03 radiation 20 90 < th dose dependent no NA NA
295 88.06 atmosphere 1015 270 < th dose independent rect. 17 13
296 88.06 humidity 50 720 > th dose independent rect. 17 22
309 88.14 atmosphere 1015 720 < th dose independent rect. 18 11
336 88.30 radiation 10 720 < th dose dependent rect. 15 17
337 88.31 humidity 60 90 > th dose independent rect. 3 19
340 88.33 radiation 40 270 < th dose dependent rect. 1 13
343 88.35 radiation 10 720 < th dose dependent rect. 13 19
349 88.38 radiation 10 720 < th dose dependent rect. 7 22
358 88.42 temperature 15 270 > th dose dependent rect. 3 18
369 88.50 humidity 70 720 < th dose independent rect. 15 1
371 88.51 humidity 50 90 > th dose dependent rect. 3 12
398 88.63 radiation 40 270 < th dose dependent rect. 10 20
401 88.64 radiation 1 720 > th dose dependent rect. 15 16
409 88.67 atmosphere 1015 720 < th dose independent rect. 8 22
411 88.68 radiation 40 720 < th dose independent rect. 18 19
417 88.69 radiation 40 90 < th dose dependent rect. 3 8
421 88.70 radiation 10 720 < th dose dependent rect. 7 15
481 88.93 radiation 10 720 < th dose dependent rect. 3 19
489 88.96 humidity 50 720 > th dose independent rect. 3 10
490 88.96 radiation 10 720 < th dose dependent sin 12 NA
519 89.02 radiation 1 270 < th dose independent rect. 1 21
549 89.09 radiation 10 720 < th dose dependent rect. 1 18
563 89.13 radiation 10 720 > th dose independent rect. 15 2
569 89.14 radiation 1 30 > th dose dependent rect. 15 21
571 89.15 radiation 1 720 > th dose dependent rect. 15 1
583 89.16 humidity 50 90 > th dose dependent rect. 3 19
586 89.17 atmosphere 1015 720 < th dose independent rect. 18 19
590 89.18 atmosphere 1000 90 > th dose independent rect. 3 19
609 89.21 radiation 10 720 < th dose dependent sin 14 NA
651 89.33 temperature 15 90 > th dose independent rect. 3 12
652 89.33 radiation 20 90 < th dose independent rect. 3 20
663 89.38 radiation 20 720 < th dose dependent rect. 15 7
734 89.51 atmosphere 1010 720 < th dose independent rect. 3 1
759 89.57 radiation 1 720 > th dose independent rect. 5 13
782 89.59 temperature 10 90 > th dose dependent rect. 22 5
791 89.60 radiation 10 270 < th dose dependent rect. 21 23
800 89.62 radiation 20 90 < th dose dependent rect. 17 18
807 89.64 radiation 20 270 < th dose independent rect. 11 19
822 89.67 humidity 60 10 > th dose dependent rect. 3 21
863 89.75 radiation 40 30 < th dose independent rect. 3 19
896 89.80 atmosphere 1015 720 < th dose independent rect. 17 5
897 89.80 radiation 40 10 < th dose independent rect. 3 9
944 89.85 radiation 1 90 < th dose independent rect. 3 20
955 89.88 radiation 10 720 < th dose independent rect. 15 15
984 89.94 radiation 1 720 < th dose independent rect. 11 18
989 89.95 wind 1 720 > th dose independent rect. 3 2
997 89.96 radiation 10 270 < th dose independent rect. 8 22