Os01g0177200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquitin-specific protease 14.
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Os01g0177200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquitin-specific protease 14.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.68 | 0.273 | 8.55 | 1.21 | 0.701 | 0.484 | 0.0167 | 1.4 | -0.124 | 13.7 | 83.03 | 6278 | -- | -- |
| 36.23 | 0.28 | 8.55 | 1.21 | 0.704 | 0.561 | -0.019 | -- | -0.149 | 13.6 | 77.6 | 7683 | -- | -- |
| 33.68 | 0.27 | 8.55 | 1.21 | 0.702 | 0.484 | -- | 1.41 | -0.126 | 13.7 | 83.51 | 6278 | -- | -- |
| 36.14 | 0.28 | 8.54 | 1.19 | 0.688 | 0.546 | -- | -- | -0.128 | 13.7 | 76.2 | 7657 | -- | -- |
| 47.02 | 0.321 | 8.53 | 1.08 | -- | 0.93 | -- | 0.226 | -0.0525 | -- | 85 | 6144 | -- | -- |
| 40.38 | 0.298 | 8.53 | 1.13 | 0.707 | -- | -0.00526 | -- | -0.0746 | 13.9 | -- | -- | -- | -- |
| 40.38 | 0.298 | 8.53 | 1.13 | 0.707 | -- | -- | -- | -0.0746 | 13.9 | -- | -- | -- | -- |
| 47.12 | 0.321 | 8.53 | 1.08 | -- | 0.936 | -- | -- | -0.0522 | -- | 85 | 6144 | -- | -- |
| 56.68 | 0.351 | 8.55 | -- | 0.698 | 0.828 | -- | -- | -0.138 | 13.8 | 35 | 8786 | -- | -- |
| 70.55 | 0.392 | 8.54 | 1.1 | -- | -- | -- | -- | -0.091 | -- | -- | -- | -- | -- |
| 73.84 | 0.402 | 8.56 | -- | 0.686 | -- | -- | -- | -0.2 | 13.9 | -- | -- | -- | -- |
| 77.7 | 0.412 | 8.56 | -- | -- | 0.959 | -- | -- | -0.171 | -- | 85 | 6144 | -- | -- |
| 102.33 | 0.472 | 8.57 | -- | -- | -- | -- | -- | -0.213 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.31 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 8 | 5 |
| 2 | 32.33 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 4 | 32.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 5 |
| 5 | 32.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 5 |
| 8 | 32.49 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 9 | 32.50 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 5 |
| 22 | 32.71 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 28 | 32.74 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 2 | 11 |
| 42 | 32.90 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 44 | 32.90 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 54 | 32.96 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 72 | 33.00 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 6 |
| 79 | 33.03 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 202 | 33.46 | humidity | 60.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 215 | 33.49 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 230 | 33.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 309 | 33.74 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 317 | 33.75 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 21 | 14 |
| 319 | 33.76 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 324 | 33.77 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 368 | 33.85 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 369 | 33.85 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 397 | 33.87 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 11 |
| 429 | 33.92 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 8 |
| 446 | 33.95 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 476 | 33.98 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 516 | 34.04 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 518 | 34.04 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 522 | 34.05 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 578 | 34.12 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 8 | 5 |
| 594 | 34.14 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 5 |
| 616 | 34.16 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 630 | 34.17 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 638 | 34.18 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 654 | 34.20 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 667 | 34.21 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 675 | 34.22 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 683 | 34.22 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 692 | 34.23 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 751 | 34.28 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 765 | 34.29 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 777 | 34.30 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 781 | 34.30 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 789 | 34.31 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 834 | 34.34 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 842 | 34.35 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 860 | 34.36 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 861 | 34.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 20 | 17 |
| 897 | 34.38 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 908 | 34.38 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 966 | 34.42 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 4 | 2 |