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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0176100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.95 (0.0425) R2 : 0.695
β1 : 2.84 (0.153) R2dD : 0.234 R2D : 0.0731
β2 : 2.44 (0.108) R2dC : 0.349 R2C : 0.286
β3 : 1.17 (0.142) R2dE : 0.0563 R2E : -0.135
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.63 (0.0965) R2dN8 : 0.298 R2N8 : 0.0709
σ : 0.779
deviance : 279.46
__
_____
C
peak time of C : 4.6
E
wheather : radiation
threshold : 39.17
memory length : 1104
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 11.6
open length of G : 0.551

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
269.16 0.771 4.95 2.92 2.42 1.45 0.358 -3.08 1.58 4.42 20 1190 11.1 1.05
282.09 0.782 4.95 2.83 2.41 1.4 0.476 -- 1.63 4.47 32.59 1132 11.4 0.85
267.21 0.761 4.96 2.86 2.42 1.5 -- -3.23 1.56 4.43 19.96 1126 11.3 0.75
279.46 0.779 4.95 2.84 2.44 1.17 -- -- 1.63 4.6 39.17 1104 11.6 0.551
580.05 1.12 4.98 2.95 -- 1.31 -- -3.04 1.58 -- 20 1199 11.4 0.8
319.25 0.838 5.02 2.68 2.37 -- 0.382 -- 1.31 4.25 -- -- -- --
319.65 0.837 5.03 2.67 2.37 -- -- -- 1.31 4.23 -- -- -- --
589.07 1.13 4.98 2.86 -- 1.08 -- -- 1.6 -- 46.26 1283 11.6 1.32
479.46 1.02 4.96 -- 2.57 1.24 -- -- 1.53 4.42 30 1151 11.6 0.252
624.15 1.17 5.04 2.77 -- -- -- -- 1.37 -- -- -- -- --
508.07 1.05 5.09 -- 2.43 -- -- -- 1.01 4.21 -- -- -- --
527.67 1.07 5.03 -- -- 2.19 -- -- 1.01 -- 839 1072 11.7 14
826.37 1.34 5.11 -- -- -- -- -- 1.06 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 280.93 radiation 20.0 1440 < th dose dependent rect. 11 1
2 282.57 wind 9.0 43200 > th dose dependent rect. 21 2
3 282.92 humidity 90.0 14400 > th dose dependent rect. 6 1
5 283.36 humidity 90.0 43200 < th dose independent rect. 4 1
6 283.91 humidity 90.0 14400 > th dose independent rect. 6 2
7 284.20 wind 9.0 43200 > th dose dependent rect. 24 2
9 284.58 temperature 20.0 90 > th dose independent rect. 19 11
10 284.78 radiation 20.0 30 < th dose dependent rect. 19 21
11 284.99 radiation 20.0 1440 < th dose independent rect. 11 1
12 285.03 wind 9.0 43200 > th dose independent rect. 24 2
15 285.26 wind 7.0 43200 < th dose independent rect. 1 1
16 285.28 wind 1.0 14400 < th dose dependent rect. 1 1
24 285.92 radiation 10.0 1440 > th dose independent rect. 11 1
25 286.01 humidity 90.0 14400 > th dose independent rect. 12 20
26 286.02 wind 1.0 14400 < th dose independent rect. 1 1
27 286.07 radiation 40.0 720 < th dose dependent rect. 9 11
32 286.27 humidity 70.0 14400 > th dose independent rect. 14 1
37 286.28 wind 1.0 14400 < th dose dependent rect. 14 1
38 286.29 humidity 90.0 14400 > th dose independent rect. 4 5
39 286.29 humidity 90.0 14400 > th dose independent rect. 1 18
42 286.33 radiation 20.0 720 < th dose dependent rect. 9 11
43 286.34 humidity 90.0 14400 > th dose dependent rect. 4 15
52 286.48 humidity 90.0 14400 > th dose independent rect. 2 22
55 286.50 humidity 90.0 14400 > th dose independent rect. 22 22
56 286.50 humidity 90.0 43200 > th dose dependent rect. 16 1
61 286.55 humidity 90.0 14400 < th dose independent rect. 6 2
88 286.74 wind 9.0 43200 > th dose independent rect. 22 1
101 286.85 humidity 90.0 14400 > th dose independent no NA NA
103 286.85 radiation 40.0 720 < th dose dependent rect. 9 21
104 286.86 radiation 10.0 720 < th dose independent rect. 14 15
109 286.88 humidity 90.0 14400 > th dose independent rect. 6 23
115 286.92 wind 5.0 43200 > th dose dependent rect. 8 1
118 286.97 humidity 90.0 14400 > th dose independent rect. 16 23
120 286.98 humidity 90.0 14400 > th dose independent rect. 4 23
123 286.98 humidity 90.0 14400 > th dose dependent rect. 5 21
136 287.06 radiation 20.0 30 < th dose dependent rect. 19 19
145 287.09 radiation 1.0 14400 > th dose independent rect. 18 11
151 287.13 humidity 90.0 14400 > th dose independent sin 4 NA
189 287.33 precipitation 0.1 43200 > th dose independent rect. 7 9
200 287.41 radiation 20.0 720 < th dose dependent rect. 9 20
208 287.49 wind 5.0 43200 > th dose independent rect. 7 2
211 287.50 radiation 10.0 720 < th dose independent rect. 11 9
229 287.58 humidity 90.0 14400 > th dose independent rect. 14 10
233 287.59 humidity 90.0 14400 > th dose independent sin 16 NA
240 287.61 wind 5.0 43200 < th dose independent rect. 7 2
242 287.61 radiation 10.0 720 < th dose independent rect. 9 11
247 287.62 precipitation 0.1 43200 < th dose independent rect. 7 9
248 287.62 precipitation 0.1 43200 < th dose dependent rect. 7 9
258 287.70 humidity 90.0 14400 > th dose dependent rect. 14 11
267 287.74 humidity 90.0 14400 > th dose dependent rect. 13 13
348 288.09 wind 9.0 43200 < th dose independent rect. 22 1
351 288.13 wind 1.0 14400 > th dose independent rect. 14 1
363 288.20 humidity 90.0 14400 > th dose independent rect. 22 1
364 288.20 humidity 90.0 14400 > th dose dependent sin 1 NA
378 288.25 radiation 40.0 720 < th dose dependent rect. 11 18
403 288.36 radiation 10.0 720 < th dose independent rect. 14 6
405 288.37 humidity 90.0 14400 > th dose dependent sin 17 NA
437 288.50 humidity 90.0 14400 < th dose independent rect. 24 19
440 288.52 radiation 40.0 720 < th dose independent rect. 17 20
449 288.55 radiation 40.0 720 < th dose dependent rect. 1 19
454 288.57 humidity 90.0 14400 < th dose independent rect. 6 22
480 288.68 precipitation 0.1 43200 > th dose independent rect. 6 11
486 288.70 humidity 80.0 14400 > th dose dependent rect. 16 5
493 288.73 humidity 90.0 14400 > th dose dependent rect. 9 23
494 288.73 humidity 90.0 14400 > th dose dependent rect. 22 23
502 288.75 precipitation 0.1 43200 > th dose dependent rect. 6 10
503 288.75 humidity 90.0 14400 > th dose dependent rect. 11 23
509 288.77 humidity 90.0 14400 < th dose independent rect. 22 22
514 288.78 humidity 90.0 14400 > th dose dependent no NA NA
548 288.87 humidity 90.0 14400 < th dose independent rect. 2 23
551 288.88 humidity 90.0 14400 < th dose independent rect. 13 12
556 288.89 precipitation 0.1 43200 < th dose independent rect. 6 11
557 288.89 precipitation 0.1 43200 < th dose dependent rect. 6 11
563 288.91 radiation 10.0 720 < th dose independent rect. 11 18
564 288.91 humidity 90.0 14400 < th dose independent rect. 12 21
578 288.96 humidity 90.0 14400 < th dose independent rect. 24 23
635 289.06 wind 1.0 14400 < th dose independent rect. 14 1
644 289.08 wind 5.0 43200 > th dose dependent rect. 1 1
646 289.08 humidity 70.0 14400 > th dose dependent rect. 23 20
647 289.09 humidity 90.0 14400 > th dose independent rect. 17 2
650 289.09 wind 5.0 43200 > th dose dependent rect. 1 9
652 289.10 humidity 90.0 14400 < th dose independent no NA NA
669 289.13 wind 5.0 43200 > th dose independent rect. 3 6
680 289.14 humidity 90.0 14400 < th dose independent rect. 16 23
738 289.26 humidity 90.0 14400 < th dose independent sin 17 NA
778 289.33 wind 5.0 43200 < th dose independent rect. 1 8
797 289.36 temperature 15.0 14400 > th dose dependent rect. 10 1
798 289.36 humidity 90.0 43200 > th dose dependent rect. 12 6
827 289.40 precipitation 0.1 43200 > th dose independent rect. 9 5
873 289.44 wind 5.0 43200 > th dose dependent rect. 4 5
911 289.48 wind 7.0 43200 > th dose dependent rect. 22 6
931 289.51 humidity 90.0 43200 > th dose dependent rect. 9 8