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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0175700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.67 (0.0448) R2 : 0.822
β1 : 1.24 (0.169) R2dD : 0.0236 R2D : 0.00675
β2 : 0.783 (0.166) R2dC : 0.0203 R2C : 0.182
β3 : 6.24 (0.254) R2dE : 0.563 R2E : 0.722
β4 : 8.04 (0.743) R2dD*C : 0.136 R2D*C : -0.0479
β5 : -6.67 (0.941) R2dD*E : 0.0617 R2D*E : -0.0439
γ1 : -0.26 (0.0973) R2dN8 : 0.00395 R2N8 : 0.0165
σ : 0.836
deviance : 316.24
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C
peak time of C : 9.51
E
wheather : temperature
threshold : 30.23
memory length : 263
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 1.85
open length of G : 8.41

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
316.24 0.836 4.67 1.24 0.783 6.24 8.04 -6.67 -0.26 9.51 30.23 263 1.85 8.41
338.28 0.857 4.77 0.896 0.203 6.1 3.68 -- -0.557 11.4 33.36 218 2.35 8.48
402.71 0.935 4.76 0.731 1.45 5.6 -- 0.787 -0.583 8.71 30.22 194 3.03 7.35
398.35 0.93 4.75 1.01 0.281 6.04 -- -- -0.445 10.8 33.23 214 2.39 8.4
397.3 0.928 4.79 0.781 -- 5.78 -- 1.88 -0.524 -- 35.25 190 2.91 8.23
686.88 1.23 4.72 0.447 4.28 -- 2.17 -- -0.836 8.3 -- -- -- --
701.11 1.24 4.72 0.508 4.28 -- -- -- -0.839 8.22 -- -- -- --
399.65 0.931 4.75 1 -- 6.21 -- -- -0.439 -- 33.74 217 2.45 8.38
421.82 0.957 4.77 -- 0.571 5.72 -- -- -0.615 9.33 33.07 207 2.5 8.22
1713.75 1.93 4.83 0.54 -- -- -- -- -0.79 -- -- -- -- --
707.91 1.24 4.73 -- 4.29 -- -- -- -0.896 8.21 -- -- -- --
424.53 0.96 4.78 -- -- 6.03 -- -- -0.584 -- 34.53 215 2.42 8.4
1721.43 1.94 4.84 -- -- -- -- -- -0.85 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 324.58 temperature 30 270 < th dose dependent rect. 2 8
4 348.15 temperature 15 270 > th dose dependent rect. 22 15
23 380.27 temperature 30 270 < th dose dependent sin 6 NA
37 392.65 temperature 20 270 > th dose independent rect. 22 16
41 396.20 temperature 15 270 > th dose dependent sin 6 NA
76 413.14 temperature 30 10 < th dose dependent rect. 5 7
144 431.46 temperature 20 10 > th dose dependent rect. 1 15
176 440.15 temperature 25 270 < th dose independent rect. 2 8
190 442.70 temperature 25 90 < th dose independent rect. 4 8
250 449.57 temperature 15 270 > th dose dependent rect. 6 8
405 467.14 temperature 30 10 < th dose dependent rect. 5 5
421 469.04 temperature 25 270 < th dose dependent rect. 23 20
471 472.75 temperature 20 270 > th dose independent sin 5 NA
512 476.11 temperature 20 270 < th dose independent sin 6 NA
516 476.42 temperature 10 10 > th dose dependent rect. 8 21
570 480.13 atmosphere 1010 270 < th dose independent rect. 8 7
578 480.56 temperature 10 10 > th dose dependent rect. 6 23
653 485.42 temperature 25 270 > th dose independent rect. 6 8
720 489.55 temperature 25 90 > th dose independent sin 2 NA
724 489.87 temperature 25 270 > th dose independent rect. 4 10
751 491.42 temperature 30 720 < th dose dependent rect. 21 9
752 491.48 radiation 1 270 < th dose dependent rect. 4 7
791 493.46 temperature 30 90 < th dose dependent rect. 4 17
813 494.36 temperature 15 10 > th dose dependent rect. 8 8
849 496.39 radiation 20 14400 < th dose independent rect. 24 6
852 496.54 temperature 30 720 < th dose dependent rect. 22 7
886 497.99 temperature 10 270 > th dose dependent rect. 6 21
934 499.76 temperature 30 10 < th dose dependent rect. 5 18
936 499.84 humidity 90 270 < th dose independent rect. 7 8
938 500.00 temperature 30 10 < th dose dependent rect. 5 16
961 500.86 temperature 30 90 < th dose dependent rect. 4 19
992 502.32 temperature 10 10 > th dose dependent rect. 10 19