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Os01g0174200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.6 (0.0197) R2 : 0.461
β1 : -0.699 (0.0722) R2dD : 0.115 R2D : 0.0884
β2 : 0.822 (0.0472) R2dC : 0.36 R2C : 0.346
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.121 (0.0421) R2dN8 : 0.0131 R2N8 : -0.00538
σ : 0.371
deviance : 62.62
__
_____
C
peak time of C : 1.28
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.74 0.344 7.59 -0.731 0.266 0.564 1.05 -0.42 -0.102 3.21 9.93 77 -- --
54.22 0.343 7.58 -0.73 0.232 0.596 0.826 -- -0.0835 4.02 9.95 77 -- --
55.93 0.348 7.59 -0.747 0.278 0.544 -- 0.146 -0.0999 3.1 7.669 74 -- --
55.73 0.348 7.58 -0.738 0.256 0.551 -- -- -0.106 2.55 9.948 77 -- --
58.07 0.355 7.59 -0.728 -- 0.695 -- 0.0871 -0.11 -- 9.931 86 -- --
62.05 0.369 7.6 -0.686 0.823 -- 0.38 -- -0.119 1.36 -- -- -- --
62.62 0.371 7.6 -0.699 0.822 -- -- -- -0.121 1.28 -- -- -- --
58.09 0.355 7.59 -0.714 -- 0.693 -- -- -0.1 -- 9.95 77 -- --
69.52 0.388 7.57 -- 0.399 0.456 -- -- -0.0203 2.02 12.08 75 -- --
104.32 0.477 7.59 -0.667 -- -- -- -- -0.104 -- -- -- -- --
75.49 0.406 7.58 -- 0.81 -- -- -- -0.043 1.25 -- -- -- --
71.46 0.394 7.58 -- -- 0.711 -- -- -0.0321 -- 9.95 135 -- --
116.05 0.503 7.57 -- -- -- -- -- -0.0299 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.03 radiation 10.0 90 < th dose independent rect. 9 20
8 51.85 radiation 20.0 90 < th dose dependent rect. 9 21
30 53.29 wind 5.0 720 < th dose independent rect. 23 6
59 54.02 radiation 10.0 90 < th dose independent no NA NA
76 54.21 radiation 10.0 90 < th dose independent rect. 15 23
88 54.33 radiation 10.0 90 < th dose independent rect. 17 23
97 54.43 radiation 10.0 90 < th dose independent rect. 13 23
106 54.55 precipitation 0.1 720 < th dose independent rect. 15 14
107 54.55 precipitation 0.1 720 < th dose dependent rect. 15 14
122 54.66 radiation 10.0 90 < th dose dependent no NA NA
123 54.67 humidity 70.0 720 > th dose dependent rect. 5 2
134 54.73 radiation 40.0 270 < th dose independent rect. 1 13
135 54.73 precipitation 0.1 720 < th dose independent rect. 17 18
137 54.73 precipitation 0.1 720 < th dose dependent rect. 17 18
141 54.76 precipitation 0.1 720 < th dose independent rect. 7 22
143 54.76 precipitation 0.1 720 < th dose dependent rect. 7 22
146 54.79 humidity 90.0 720 > th dose dependent rect. 5 19
147 54.80 precipitation 0.1 720 < th dose independent rect. 13 16
148 54.80 precipitation 0.1 720 < th dose dependent rect. 13 16
158 54.84 radiation 10.0 90 < th dose dependent rect. 13 23
164 54.88 radiation 40.0 270 < th dose independent rect. 8 21
168 54.90 radiation 10.0 90 < th dose dependent rect. 17 23
169 54.91 radiation 10.0 90 < th dose dependent rect. 15 23
179 54.97 radiation 40.0 270 < th dose dependent rect. 8 10
194 55.04 radiation 20.0 270 < th dose independent rect. 8 10
195 55.04 precipitation 0.1 720 < th dose independent rect. 17 10
196 55.04 precipitation 0.1 720 < th dose dependent rect. 17 10
216 55.13 radiation 10.0 90 < th dose independent rect. 21 23
225 55.16 humidity 90.0 720 > th dose independent rect. 4 20
234 55.20 radiation 40.0 720 < th dose independent rect. 17 18
241 55.25 radiation 40.0 270 < th dose dependent rect. 20 23
256 55.34 humidity 90.0 270 > th dose independent rect. 5 4
263 55.36 precipitation 0.1 720 < th dose independent rect. 17 12
266 55.36 precipitation 0.1 720 < th dose dependent rect. 17 12
273 55.39 temperature 25.0 720 < th dose independent rect. 20 6
275 55.39 temperature 15.0 10 > th dose dependent sin 22 NA
279 55.39 radiation 10.0 90 < th dose dependent rect. 21 23
292 55.43 precipitation 0.1 720 < th dose independent rect. 17 8
294 55.43 precipitation 0.1 720 < th dose dependent rect. 17 8
297 55.44 radiation 1.0 720 > th dose independent rect. 17 19
308 55.50 radiation 20.0 270 < th dose independent rect. 21 21
314 55.51 radiation 10.0 90 < th dose independent rect. 19 23
342 55.59 temperature 15.0 90 > th dose dependent rect. 6 17
345 55.60 radiation 40.0 270 < th dose independent rect. 8 10
348 55.60 radiation 10.0 90 < th dose independent rect. 2 23
371 55.66 radiation 40.0 270 < th dose independent sin 4 NA
380 55.67 radiation 40.0 270 < th dose dependent rect. 23 15
408 55.76 humidity 90.0 720 < th dose independent rect. 4 18
413 55.77 radiation 40.0 270 < th dose independent rect. 20 23
415 55.78 humidity 90.0 720 < th dose independent rect. 17 2
428 55.80 temperature 15.0 10 > th dose dependent rect. 6 18
458 55.86 radiation 1.0 1440 < th dose independent rect. 16 1
463 55.87 radiation 1.0 1440 > th dose independent rect. 16 1
469 55.88 wind 9.0 720 < th dose dependent rect. 23 6
477 55.89 temperature 30.0 90 < th dose dependent rect. 10 9
488 55.91 temperature 25.0 720 < th dose independent rect. 20 10
546 55.98 radiation 1.0 1440 < th dose independent rect. 6 23
569 56.02 radiation 1.0 1440 < th dose independent rect. 6 13
570 56.02 radiation 1.0 1440 < th dose independent rect. 6 21
579 56.03 radiation 1.0 1440 < th dose independent rect. 6 18
586 56.03 temperature 15.0 30 > th dose dependent rect. 6 20
603 56.05 precipitation 0.1 4320 > th dose independent rect. 19 5
613 56.07 radiation 1.0 1440 < th dose independent sin 13 NA
623 56.08 temperature 30.0 30 < th dose dependent sin 0 NA
629 56.09 radiation 1.0 1440 < th dose independent rect. 14 18
631 56.09 radiation 1.0 1440 < th dose dependent rect. 15 2
638 56.11 radiation 1.0 1440 > th dose independent sin 13 NA
639 56.11 precipitation 0.1 4320 < th dose independent rect. 19 5
646 56.11 precipitation 0.1 4320 < th dose dependent rect. 19 5
647 56.11 temperature 10.0 270 > th dose dependent rect. 5 11
659 56.13 radiation 1.0 1440 > th dose independent rect. 14 18
682 56.14 radiation 10.0 30 < th dose dependent rect. 23 23
687 56.15 temperature 10.0 720 > th dose dependent rect. 17 3
692 56.15 radiation 1.0 90 > th dose dependent rect. 12 23
698 56.16 radiation 1.0 1440 > th dose independent rect. 6 23
731 56.20 radiation 1.0 1440 > th dose independent rect. 6 13
733 56.20 radiation 1.0 1440 < th dose independent rect. 15 14
746 56.20 precipitation 0.1 720 > th dose dependent rect. 2 2
758 56.22 precipitation 0.1 720 > th dose independent rect. 2 2
769 56.22 temperature 20.0 90 > th dose dependent rect. 6 11
784 56.23 radiation 10.0 90 < th dose dependent rect. 19 23
789 56.24 radiation 1.0 1440 < th dose independent rect. 14 22
823 56.27 radiation 1.0 1440 < th dose independent rect. 15 10
825 56.27 radiation 1.0 1440 < th dose independent rect. 15 12
834 56.28 precipitation 0.1 720 < th dose independent rect. 17 3
846 56.28 precipitation 0.1 720 < th dose dependent rect. 17 3
922 56.33 radiation 1.0 1440 > th dose independent rect. 14 22
933 56.34 radiation 20.0 720 < th dose independent rect. 17 19
939 56.34 radiation 40.0 270 > th dose independent rect. 12 23
960 56.36 radiation 1.0 1440 < th dose independent sin 21 NA
976 56.36 radiation 1.0 1440 > th dose independent rect. 18 23
987 56.37 radiation 1.0 1440 < th dose independent rect. 4 15
999 56.37 radiation 1.0 1440 < th dose independent rect. 4 21