Os01g0170900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0170900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.31 | 0.645 | 5.95 | -1.74 | 1.62 | -0.577 | 0.689 | -1.88 | -0.568 | 0.657 | 50 | 4321 | -- | -- |
| 189.97 | 0.642 | 5.9 | -1.68 | 1.6 | -1.24 | 0.66 | -- | -0.581 | 0.67 | 48.21 | 4030 | -- | -- |
| 189.83 | 0.642 | 5.95 | -1.77 | 1.62 | -0.555 | -- | -1.88 | -0.573 | 0.684 | 50 | 4399 | -- | -- |
| 190.74 | 0.643 | 5.9 | -1.6 | 1.63 | -1.22 | -- | -- | -0.572 | 0.687 | 48 | 4377 | -- | -- |
| 349.56 | 0.871 | 5.96 | -1.92 | -- | 0.265 | -- | -3.56 | -0.574 | -- | 48 | 4395 | -- | -- |
| 218.18 | 0.692 | 5.88 | -2.09 | 1.58 | -- | 0.492 | -- | -0.48 | 0.662 | -- | -- | -- | -- |
| 219.21 | 0.693 | 5.88 | -2.11 | 1.58 | -- | -- | -- | -0.483 | 0.689 | -- | -- | -- | -- |
| 297.18 | 0.806 | 5.85 | -1.98 | -- | -0.859 | -- | -- | -0.43 | -- | 75 | 4553 | -- | -- |
| 248.8 | 0.735 | 5.88 | -- | 1.62 | -1.71 | -- | -- | -0.55 | 0.598 | 50 | 4376 | -- | -- |
| 375.62 | 0.906 | 5.85 | -2.05 | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
| 336.25 | 0.858 | 5.83 | -- | 1.55 | -- | -- | -- | -0.248 | 0.625 | -- | -- | -- | -- |
| 400.1 | 0.935 | 5.8 | -- | -- | -0.901 | -- | -- | -0.21 | -- | 75 | 4553 | -- | -- |
| 486.56 | 1.03 | 5.8 | -- | -- | -- | -- | -- | -0.227 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 174.22 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 3 | 174.30 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 33 | 176.56 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 37 | 176.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 81 | 178.45 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 86 | 178.68 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 87 | 178.70 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 102 | 179.08 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 104 | 179.09 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 7 |
| 109 | 179.15 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 112 | 179.33 | wind | 3.0 | 14400 | < th | dose independent | sin | 7 | NA |
| 143 | 179.74 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 144 | 179.77 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 10 |
| 148 | 179.82 | wind | 3.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 259 | 180.83 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 4 |
| 266 | 180.86 | wind | 3.0 | 14400 | < th | dose dependent | sin | 6 | NA |
| 352 | 181.51 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 4 |
| 363 | 181.57 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 367 | 181.63 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 438 | 182.29 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 12 | 19 |
| 470 | 182.57 | wind | 1.0 | 14400 | > th | dose independent | rect. | 8 | 3 |
| 539 | 183.07 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 552 | 183.21 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 4 |
| 553 | 183.21 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 589 | 183.38 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 622 | 183.62 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 625 | 183.65 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 654 | 183.86 | wind | 1.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 702 | 184.11 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 15 |
| 746 | 184.29 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 22 | 14 |
| 750 | 184.34 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 751 | 184.35 | wind | 1.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 774 | 184.48 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 22 | 14 |
| 781 | 184.49 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 1 | 11 |
| 790 | 184.51 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 5 | 6 |
| 799 | 184.59 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 825 | 184.74 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 3 | 9 |
| 853 | 184.78 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 17 |
| 881 | 184.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 882 | 184.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 932 | 185.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 933 | 185.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |