Os01g0170800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
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Os01g0170800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein prenyltransferase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131.56 | 0.539 | 6.93 | 2.22 | 1.24 | 1.54 | 0.226 | -0.0678 | 0.79 | 20.8 | 78.84 | 1383 | -- | -- |
| 131.57 | 0.534 | 6.93 | 2.21 | 1.25 | 1.54 | 0.228 | -- | 0.789 | 20.8 | 78.83 | 1382 | -- | -- |
| 131.73 | 0.535 | 6.93 | 2.21 | 1.24 | 1.54 | -- | -0.0592 | 0.79 | 20.8 | 78.85 | 1382 | -- | -- |
| 131.74 | 0.535 | 6.93 | 2.21 | 1.24 | 1.54 | -- | -- | 0.789 | 20.8 | 78.9 | 1382 | -- | -- |
| 218.93 | 0.689 | 6.93 | 2.21 | -- | 1.66 | -- | -0.27 | 0.746 | -- | 79 | 1421 | -- | -- |
| 160.41 | 0.594 | 6.95 | 2.14 | 1.28 | -- | 0.197 | -- | 0.718 | 20.5 | -- | -- | -- | -- |
| 160.53 | 0.593 | 6.95 | 2.13 | 1.28 | -- | -- | -- | 0.718 | 20.5 | -- | -- | -- | -- |
| 218.57 | 0.689 | 6.9 | 2.22 | -- | 1.66 | -- | -- | 0.796 | -- | 79 | 1423 | -- | -- |
| 240.82 | 0.723 | 6.93 | -- | 1.57 | 1.76 | -- | -- | 0.788 | 20.5 | 85.8 | 2094 | -- | -- |
| 251.95 | 0.742 | 6.91 | 2.13 | -- | -- | -- | -- | 0.706 | -- | -- | -- | -- | -- |
| 280.57 | 0.784 | 7 | -- | 1.27 | -- | -- | -- | 0.481 | 20.7 | -- | -- | -- | -- |
| 333.3 | 0.85 | 6.94 | -- | -- | 1.67 | -- | -- | 0.603 | -- | 84.8 | 1491 | -- | -- |
| 371.53 | 0.9 | 6.97 | -- | -- | -- | -- | -- | 0.47 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.15 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 19 |
| 3 | 131.24 | humidity | 80 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 4 | 131.34 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 16 |
| 10 | 131.53 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 11 |
| 15 | 131.60 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 11 |
| 16 | 131.61 | humidity | 80 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 27 | 131.79 | humidity | 80 | 1440 | < th | dose independent | sin | 23 | NA |
| 30 | 131.85 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 41 | 132.01 | humidity | 80 | 1440 | > th | dose independent | sin | 22 | NA |
| 46 | 132.03 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 52 | 132.10 | wind | 3 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 69 | 132.38 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 11 |
| 70 | 132.39 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 21 |
| 71 | 132.40 | humidity | 80 | 1440 | < th | dose independent | rect. | 10 | 5 |
| 77 | 132.47 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 17 |
| 78 | 132.48 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 88 | 132.60 | humidity | 80 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 90 | 132.63 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 96 | 132.70 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 141 | 132.97 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 23 |
| 143 | 132.98 | humidity | 80 | 1440 | > th | dose independent | rect. | 19 | 21 |
| 147 | 133.01 | humidity | 70 | 1440 | > th | dose independent | rect. | 12 | 16 |
| 150 | 133.01 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 180 | 133.10 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 213 | 133.26 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 230 | 133.34 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 243 | 133.38 | humidity | 80 | 1440 | < th | dose independent | rect. | 19 | 23 |
| 267 | 133.48 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 23 |
| 274 | 133.50 | humidity | 70 | 1440 | > th | dose dependent | sin | 21 | NA |
| 284 | 133.52 | humidity | 60 | 1440 | > th | dose dependent | sin | 19 | NA |
| 320 | 133.62 | humidity | 80 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 345 | 133.70 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 20 |
| 352 | 133.73 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 412 | 133.93 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 464 | 134.08 | humidity | 60 | 1440 | > th | dose dependent | rect. | 1 | 20 |
| 487 | 134.15 | humidity | 80 | 1440 | > th | dose independent | rect. | 2 | 14 |
| 497 | 134.18 | humidity | 70 | 1440 | > th | dose independent | sin | 17 | NA |
| 559 | 134.35 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 623 | 134.52 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 719 | 134.74 | humidity | 60 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 748 | 134.79 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 873 | 135.07 | humidity | 70 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 886 | 135.09 | humidity | 90 | 1440 | < th | dose dependent | sin | 17 | NA |