Os01g0170500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF239, plant domain containing protein.
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Os01g0170500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF239, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.68 | 0.581 | 3.68 | -2.79 | 0.532 | -2.17 | -0.758 | 11.6 | 0.0686 | 14.9 | 30.3 | 4736 | -- | -- |
| 166.66 | 0.601 | 3.61 | -1.34 | 0.67 | -1.17 | -1.05 | -- | -0.514 | 15.9 | 21.7 | 5009 | -- | -- |
| 154.56 | 0.579 | 3.69 | -2.81 | 0.532 | -2.16 | -- | 11.6 | 0.0676 | 15 | 30.3 | 4772 | -- | -- |
| 159.11 | 0.587 | 3.57 | -1.09 | 0.606 | -0.972 | -- | -- | -0.438 | 15.7 | 23.5 | 5706 | -- | -- |
| 170.59 | 0.608 | 3.71 | -3.02 | -- | -2.27 | -- | 12.7 | 0.047 | -- | 30.27 | 4756 | -- | -- |
| 191.45 | 0.649 | 3.49 | -0.552 | 0.549 | -- | -0.826 | -- | -0.0871 | 15.2 | -- | -- | -- | -- |
| 193.57 | 0.652 | 3.5 | -0.569 | 0.551 | -- | -- | -- | -0.0917 | 15.5 | -- | -- | -- | -- |
| 179.05 | 0.623 | 3.58 | -1.07 | -- | -0.937 | -- | -- | -0.462 | -- | 23.51 | 6094 | -- | -- |
| 183.92 | 0.632 | 3.53 | -- | 0.618 | -0.661 | -- | -- | -0.232 | 15.3 | 23.59 | 5183 | -- | -- |
| 210.52 | 0.678 | 3.5 | -0.592 | -- | -- | -- | -- | -0.106 | -- | -- | -- | -- | -- |
| 202.09 | 0.665 | 3.48 | -- | 0.562 | -- | -- | -- | -0.0284 | 15.5 | -- | -- | -- | -- |
| 192.49 | 0.646 | 3.51 | -- | -- | -0.762 | -- | -- | -0.194 | -- | 30.5 | 7631 | -- | -- |
| 219.76 | 0.692 | 3.48 | -- | -- | -- | -- | -- | -0.0406 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.15 | wind | 5 | 43200 | > th | dose independent | rect. | 22 | 19 |
| 3 | 145.26 | wind | 5 | 43200 | < th | dose independent | rect. | 22 | 19 |
| 27 | 145.87 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 19 |
| 29 | 145.89 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 14 |
| 55 | 146.09 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 59 | 146.13 | wind | 5 | 43200 | > th | dose dependent | rect. | 21 | 20 |
| 64 | 146.17 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 22 |
| 68 | 146.20 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 22 |
| 73 | 146.23 | wind | 5 | 43200 | > th | dose independent | sin | 2 | NA |
| 84 | 146.28 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 85 | 146.29 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 89 | 146.29 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 90 | 146.30 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 99 | 146.35 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 23 |
| 101 | 146.37 | wind | 5 | 43200 | < th | dose independent | sin | 2 | NA |
| 109 | 146.41 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 23 |
| 117 | 146.44 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 9 |
| 126 | 146.46 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 23 |
| 129 | 146.48 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 17 |
| 146 | 146.55 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 147 | 146.56 | radiation | 30 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 154 | 146.57 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 158 | 146.59 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 23 |
| 169 | 146.61 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 21 |
| 185 | 146.65 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 186 | 146.65 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 191 | 146.66 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 207 | 146.71 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 23 |
| 210 | 146.72 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 23 |
| 217 | 146.73 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 23 |
| 367 | 146.98 | wind | 5 | 43200 | > th | dose dependent | rect. | 14 | 23 |
| 500 | 147.27 | wind | 5 | 43200 | > th | dose dependent | sin | 1 | NA |
| 587 | 147.47 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 614 | 147.54 | wind | 5 | 43200 | > th | dose dependent | rect. | 7 | 9 |
| 623 | 147.56 | wind | 5 | 43200 | > th | dose dependent | sin | 16 | NA |
| 750 | 147.93 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 6 |
| 800 | 148.08 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 802 | 148.09 | wind | 7 | 43200 | < th | dose independent | sin | 15 | NA |
| 835 | 148.15 | wind | 7 | 43200 | > th | dose independent | sin | 15 | NA |