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Os01g0170100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : D111/G-patch domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.69 (0.0171) R2 : 0.519
β1 : -1.36 (0.0626) R2dD : 0.516 R2D : 0.519
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0101 (0.0365) R2dN8 : 0.000109 R2N8 : 0.0026
σ : 0.321
deviance : 47.08
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.59 0.276 7.69 -1.42 0.33 0.302 0.287 0.993 -0.00218 10.9 29.4 234 -- --
34.92 0.275 7.68 -1.3 0.327 0.401 0.263 -- 0.0131 10.9 29.51 247 -- --
34.9 0.275 7.69 -1.41 0.331 0.297 -- 0.908 0.00163 10.8 29.29 237 -- --
35.21 0.276 7.68 -1.3 0.326 0.398 -- -- 0.0135 10.8 29.55 247 -- --
40.72 0.297 7.7 -1.39 -- 0.351 -- 0.93 -0.00494 -- 29.6 447 -- --
39 0.293 7.68 -1.37 0.369 -- 0.291 -- 0.00773 9.05 -- -- -- --
39.3 0.294 7.68 -1.36 0.368 -- -- -- 0.00777 8.98 -- -- -- --
40.8 0.297 7.69 -1.28 -- 0.465 -- -- -0.0058 -- 29.8 445 -- --
78.61 0.413 7.65 -- 0.31 0.572 -- -- 0.146 11 29.61 275 -- --
47.08 0.321 7.69 -1.36 -- -- -- -- 0.0101 -- -- -- -- --
87.94 0.439 7.64 -- 0.367 -- -- -- 0.159 9.26 -- -- -- --
81.99 0.422 7.64 -- -- 0.649 -- -- 0.218 -- 27.77 858 -- --
95.8 0.457 7.65 -- -- -- -- -- 0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.14 temperature 30 270 < th dose independent rect. 2 21
5 34.25 humidity 70 270 > th dose independent rect. 9 13
8 34.32 temperature 30 270 > th dose independent rect. 18 22
9 34.33 temperature 30 270 < th dose independent rect. 5 16
11 34.34 humidity 70 270 > th dose independent sin 20 NA
13 34.37 temperature 30 270 > th dose independent rect. 10 6
15 34.39 humidity 70 270 < th dose independent rect. 11 6
19 34.43 temperature 30 270 < th dose independent rect. 5 14
23 34.46 temperature 30 270 < th dose independent sin 1 NA
36 34.52 humidity 70 270 < th dose independent rect. 10 10
47 34.52 radiation 20 4320 < th dose dependent rect. 7 1
66 34.56 humidity 90 270 < th dose dependent rect. 11 19
71 34.59 radiation 10 4320 < th dose dependent rect. 7 5
78 34.61 humidity 70 270 > th dose independent rect. 13 9
82 34.63 humidity 60 270 > th dose dependent sin 21 NA
116 34.67 humidity 90 43200 > th dose independent rect. 15 2
117 34.67 humidity 90 43200 > th dose dependent rect. 16 1
121 34.68 humidity 60 90 > th dose dependent sin 18 NA
122 34.68 humidity 60 270 > th dose dependent rect. 9 13
123 34.69 temperature 30 270 > th dose independent sin 1 NA
149 34.72 humidity 70 270 < th dose independent sin 21 NA
158 34.74 humidity 70 270 > th dose independent rect. 3 20
163 34.76 wind 9 43200 < th dose independent rect. 18 1
166 34.76 humidity 90 43200 > th dose dependent rect. 15 3
169 34.77 humidity 70 270 > th dose independent rect. 5 17
179 34.78 wind 5 14400 < th dose dependent rect. 13 2
181 34.79 wind 3 14400 > th dose independent rect. 13 2
187 34.80 wind 3 14400 < th dose independent rect. 13 2
192 34.80 wind 5 14400 < th dose dependent rect. 13 7
202 34.82 humidity 80 10 < th dose independent rect. 12 19
204 34.82 temperature 30 270 < th dose independent rect. 13 23
215 34.84 wind 3 14400 > th dose independent rect. 10 10
219 34.84 radiation 40 1440 < th dose independent rect. 18 15
226 34.85 wind 3 14400 > th dose independent rect. 10 6
234 34.86 wind 9 43200 > th dose independent rect. 18 1
236 34.86 wind 3 14400 < th dose independent rect. 10 6
241 34.86 radiation 1 4320 > th dose dependent rect. 7 1
244 34.86 wind 5 14400 < th dose dependent rect. 10 10
247 34.87 humidity 70 270 > th dose independent rect. 12 23
251 34.88 radiation 10 4320 < th dose independent rect. 7 4
252 34.88 wind 3 14400 > th dose independent rect. 13 7
254 34.88 wind 3 14400 < th dose independent rect. 9 10
271 34.89 radiation 10 4320 < th dose dependent rect. 18 17
277 34.90 radiation 40 1440 > th dose dependent rect. 8 1
296 34.91 humidity 70 4320 > th dose independent rect. 10 1
321 34.92 radiation 10 4320 < th dose dependent rect. 22 13
331 34.93 wind 3 14400 < th dose independent rect. 13 7
345 34.94 wind 5 14400 < th dose dependent rect. 18 1
378 34.95 humidity 60 270 > th dose dependent rect. 3 20
402 34.98 radiation 40 1440 < th dose independent rect. 7 2
404 34.98 radiation 40 1440 < th dose independent rect. 5 4
407 34.98 humidity 90 43200 > th dose independent rect. 13 5
415 34.98 wind 1 14400 > th dose dependent rect. 14 1
421 34.98 humidity 90 43200 > th dose dependent rect. 9 9
423 34.99 wind 3 14400 > th dose independent rect. 18 1
433 34.99 wind 1 14400 > th dose dependent rect. 18 2
442 35.00 humidity 90 14400 > th dose independent rect. 2 6
445 35.00 radiation 40 1440 < th dose independent rect. 20 13
451 35.00 wind 9 14400 < th dose dependent rect. 18 1
455 35.01 humidity 90 43200 < th dose independent rect. 16 1
462 35.01 humidity 70 270 < th dose independent rect. 18 23
464 35.01 temperature 10 14400 > th dose dependent rect. 13 1
477 35.02 humidity 90 43200 > th dose independent rect. 9 8
486 35.02 wind 1 14400 > th dose dependent rect. 14 6
491 35.03 temperature 30 270 < th dose independent no NA NA
519 35.03 humidity 60 270 > th dose dependent rect. 13 9
526 35.04 temperature 30 14400 < th dose independent rect. 13 1
541 35.04 temperature 10 14400 > th dose dependent rect. 8 6
558 35.05 temperature 10 14400 > th dose dependent rect. 8 1
560 35.05 temperature 30 14400 < th dose dependent rect. 8 1
571 35.05 humidity 60 270 > th dose dependent rect. 5 17
574 35.05 humidity 60 270 > th dose dependent rect. 2 23
582 35.06 radiation 10 4320 < th dose independent rect. 17 18
586 35.06 temperature 10 14400 > th dose dependent rect. 10 1
607 35.07 temperature 30 90 > th dose independent rect. 13 4
625 35.07 wind 9 43200 > th dose dependent rect. 18 2
626 35.07 temperature 10 14400 > th dose dependent rect. 8 3
682 35.09 temperature 30 14400 > th dose independent rect. 11 1
683 35.09 temperature 30 14400 > th dose independent rect. 11 3
688 35.09 radiation 10 4320 < th dose independent rect. 5 6
724 35.10 wind 3 14400 < th dose independent rect. 18 1
748 35.10 temperature 30 270 < th dose independent rect. 6 23
775 35.11 temperature 25 14400 > th dose independent rect. 8 1
776 35.11 temperature 30 14400 > th dose independent rect. 13 1
780 35.11 temperature 25 14400 > th dose independent rect. 1 9
814 35.11 humidity 90 270 < th dose dependent rect. 11 6
823 35.12 radiation 20 720 < th dose independent sin 9 NA
847 35.12 wind 1 14400 > th dose dependent rect. 16 4
902 35.13 temperature 30 14400 < th dose dependent rect. 10 1
946 35.14 temperature 30 270 > th dose independent no NA NA
948 35.14 humidity 90 43200 < th dose independent rect. 9 5