Os01g0168000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os01g0168000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.66 | 0.512 | 7.53 | 0.177 | 0.634 | -0.796 | 0.305 | -0.792 | -0.368 | 17.4 | 21.75 | 821 | -- | -- |
| 120.4 | 0.511 | 7.5 | 0.372 | 0.642 | -0.733 | 0.185 | -- | -0.317 | 17.4 | 21.98 | 755 | -- | -- |
| 118.87 | 0.508 | 7.53 | 0.185 | 0.632 | -0.796 | -- | -0.776 | -0.367 | 17.4 | 21.73 | 835 | -- | -- |
| 120.44 | 0.511 | 7.5 | 0.395 | 0.655 | -0.757 | -- | -- | -0.317 | 17.4 | 21.76 | 750 | -- | -- |
| 137.13 | 0.545 | 7.5 | 0.192 | -- | -0.793 | -- | -0.674 | -0.337 | -- | 21.9 | 1119 | -- | -- |
| 142.64 | 0.56 | 7.55 | 0.121 | 0.602 | -- | 0.157 | -- | -0.548 | 16.5 | -- | -- | -- | -- |
| 142.71 | 0.559 | 7.55 | 0.122 | 0.604 | -- | -- | -- | -0.547 | 16.5 | -- | -- | -- | -- |
| 139.22 | 0.55 | 7.49 | 0.378 | -- | -0.767 | -- | -- | -0.313 | -- | 22.07 | 1119 | -- | -- |
| 123.71 | 0.518 | 7.52 | -- | 0.634 | -0.655 | -- | -- | -0.374 | 17.3 | 22.05 | 763 | -- | -- |
| 162.19 | 0.595 | 7.55 | 0.0986 | -- | -- | -- | -- | -0.563 | -- | -- | -- | -- | -- |
| 143.1 | 0.56 | 7.55 | -- | 0.601 | -- | -- | -- | -0.561 | 16.5 | -- | -- | -- | -- |
| 142.63 | 0.556 | 7.51 | -- | -- | -0.666 | -- | -- | -0.378 | -- | 22.13 | 1047 | -- | -- |
| 162.45 | 0.595 | 7.55 | -- | -- | -- | -- | -- | -0.574 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 113.84 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 2 | 114.34 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 3 | 114.44 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 4 | 114.62 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 13 | 115.40 | temperature | 15.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 17 | 115.72 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 23 | 21 |
| 23 | 116.26 | temperature | 30.0 | 270 | < th | dose dependent | sin | 8 | NA |
| 44 | 116.94 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 45 | 116.95 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 49 | 117.05 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 59 | 117.50 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 86 | 118.23 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 113 | 118.84 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 21 | 19 |
| 164 | 119.82 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 166 | 119.85 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 185 | 120.07 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 21 | 14 |
| 189 | 120.09 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 19 |
| 214 | 120.29 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 18 |
| 217 | 120.30 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 219 | 120.32 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 226 | 120.35 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 250 | 120.52 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 267 | 120.60 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 272 | 120.63 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 14 |
| 309 | 120.79 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 314 | 120.82 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 315 | 120.83 | temperature | 25.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 322 | 120.86 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 324 | 120.88 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 341 | 120.98 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 352 | 121.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 381 | 121.17 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 425 | 121.42 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 481 | 121.65 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 494 | 121.69 | temperature | 25.0 | 270 | < th | dose independent | sin | 8 | NA |
| 515 | 121.76 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 570 | 121.99 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 589 | 122.05 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 679 | 122.46 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 700 | 122.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 748 | 122.71 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 15 |
| 759 | 122.75 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 771 | 122.78 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 778 | 122.80 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 814 | 122.88 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 18 |
| 822 | 122.90 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 24 | 2 |
| 826 | 122.91 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 848 | 122.94 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 877 | 123.02 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 895 | 123.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 896 | 123.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 16 |
| 906 | 123.11 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 909 | 123.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 910 | 123.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 945 | 123.18 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 993 | 123.33 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 1000 | 123.35 | temperature | 25.0 | 270 | > th | dose independent | sin | 8 | NA |