Os01g0167700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0167700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.18 | 0.358 | 6.87 | 0.26 | 0.604 | -0.699 | 0.394 | 1.38 | 0.128 | 10.5 | 24.7 | 3893 | -- | -- |
| 58.74 | 0.357 | 6.91 | -0.0559 | 0.615 | -0.561 | 0.344 | -- | 0.0707 | 10.4 | 24.05 | 3947 | -- | -- |
| 58.81 | 0.357 | 6.87 | 0.261 | 0.604 | -0.699 | -- | 1.32 | 0.123 | 10.4 | 24.8 | 3894 | -- | -- |
| 59.23 | 0.358 | 6.91 | -0.0481 | 0.611 | -0.563 | -- | -- | 0.0662 | 10.4 | 24.2 | 3960 | -- | -- |
| 80.25 | 0.417 | 6.9 | 0.274 | -- | -0.798 | -- | 1.2 | 0.135 | -- | 24.4 | 3781 | -- | -- |
| 67.74 | 0.386 | 6.92 | -0.253 | 0.672 | -- | 0.403 | -- | 0.0209 | 10.6 | -- | -- | -- | -- |
| 68.41 | 0.387 | 6.92 | -0.236 | 0.67 | -- | -- | -- | 0.0221 | 10.6 | -- | -- | -- | -- |
| 81.09 | 0.419 | 6.92 | -0.00541 | -- | -0.714 | -- | -- | 0.0849 | -- | 24.02 | 3792 | -- | -- |
| 59.28 | 0.359 | 6.91 | -- | 0.611 | -0.576 | -- | -- | 0.0782 | 10.4 | 23.97 | 3968 | -- | -- |
| 96.07 | 0.458 | 6.93 | -0.249 | -- | -- | -- | -- | 0.0187 | -- | -- | -- | -- | -- |
| 69.88 | 0.391 | 6.91 | -- | 0.672 | -- | -- | -- | 0.0484 | 10.6 | -- | -- | -- | -- |
| 81.09 | 0.419 | 6.92 | -- | -- | -0.715 | -- | -- | 0.0863 | -- | 24 | 3793 | -- | -- |
| 97.7 | 0.461 | 6.93 | -- | -- | -- | -- | -- | 0.0464 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.11 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 2 | 58.18 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 7 | 58.33 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 8 | 58.36 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 7 |
| 14 | 58.41 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 20 | 58.43 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 21 | 58.43 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 52 | 58.53 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 56 | 58.53 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 11 | 14 |
| 58 | 58.54 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 20 | NA |
| 103 | 58.59 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 24 | 18 |
| 259 | 58.72 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 260 | 58.72 | temperature | 25.0 | 4320 | > th | dose dependent | no | NA | NA |
| 266 | 58.72 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 23 |
| 308 | 58.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 312 | 58.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 314 | 58.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 317 | 58.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 424 | 59.04 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 437 | 59.06 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 574 | 59.26 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 15 | 11 |
| 598 | 59.28 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 620 | 59.30 | temperature | 25.0 | 4320 | > th | dose independent | sin | 16 | NA |
| 635 | 59.31 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 15 | 11 |
| 692 | 59.35 | temperature | 25.0 | 4320 | < th | dose independent | sin | 16 | NA |
| 760 | 59.38 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 21 |
| 761 | 59.38 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 22 |
| 805 | 59.40 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 14 | 18 |
| 829 | 59.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 837 | 59.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 10 |
| 847 | 59.42 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 850 | 59.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 10 |
| 876 | 59.43 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 889 | 59.44 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 20 |
| 891 | 59.44 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 10 | 22 |
| 892 | 59.44 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 17 | 22 |
| 932 | 59.46 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 944 | 59.46 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 10 | 1 |
| 947 | 59.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 9 |
| 972 | 59.47 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 13 | 19 |
| 979 | 59.47 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 22 |