Os01g0167100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0167100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.77 | 0.427 | 6.59 | -0.784 | 1.81 | -2.1 | 0.993 | 1.55 | 0.0538 | 5.08 | 24.59 | 1024 | -- | -- |
| 85.5 | 0.431 | 6.55 | -0.53 | 1.8 | -2.33 | 0.924 | -- | 0.118 | 5.04 | 23.97 | 1077 | -- | -- |
| 85.18 | 0.43 | 6.59 | -0.778 | 1.82 | -2.07 | -- | 1.58 | 0.0529 | 5.09 | 24.77 | 992 | -- | -- |
| 87.6 | 0.436 | 6.56 | -0.526 | 1.81 | -2.3 | -- | -- | 0.118 | 5.03 | 24.07 | 1066 | -- | -- |
| 251.34 | 0.738 | 6.63 | -0.836 | -- | -2.47 | -- | 1.46 | -0.0188 | -- | 25.8 | 1159 | -- | -- |
| 158.46 | 0.59 | 6.46 | 0.143 | 1.9 | -- | 0.638 | -- | 0.565 | 4.63 | -- | -- | -- | -- |
| 159.53 | 0.591 | 6.46 | 0.14 | 1.9 | -- | -- | -- | 0.561 | 4.61 | -- | -- | -- | -- |
| 253.91 | 0.742 | 6.61 | -0.554 | -- | -2.57 | -- | -- | 0.026 | -- | 25.6 | 1164 | -- | -- |
| 93.71 | 0.451 | 6.53 | -- | 1.83 | -2.02 | -- | -- | 0.212 | 5.07 | 24.28 | 970 | -- | -- |
| 351.92 | 0.877 | 6.48 | 0.213 | -- | -- | -- | -- | 0.611 | -- | -- | -- | -- | -- |
| 160.04 | 0.592 | 6.46 | -- | 1.9 | -- | -- | -- | 0.546 | 4.6 | -- | -- | -- | -- |
| 260.98 | 0.752 | 6.58 | -- | -- | -2.32 | -- | -- | 0.155 | -- | 25.6 | 1157 | -- | -- |
| 353.12 | 0.877 | 6.48 | -- | -- | -- | -- | -- | 0.588 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.32 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 7 | 84.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 12 |
| 22 | 84.60 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 23 |
| 28 | 84.71 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 31 | 84.78 | temperature | 25 | 720 | < th | dose dependent | rect. | 12 | 23 |
| 46 | 84.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 57 | 84.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 77 | 85.20 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 95 | 85.32 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 101 | 85.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 111 | 85.49 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 203 | 86.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 218 | 86.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 10 |
| 378 | 87.50 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 387 | 87.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 3 |
| 431 | 87.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 587 | 88.56 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 769 | 89.69 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 807 | 89.88 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 848 | 90.06 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 929 | 90.45 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 946 | 90.53 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 952 | 90.56 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 974 | 90.64 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 21 | 3 |