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Os01g0166700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Saposin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0191) R2 : 0.00731
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0738 (0.0403) R2dN8 : 0.00944 R2N8 : 0.00731
σ : 0.36
deviance : 59.53
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.58 0.268 11.7 -0.518 0.35 -0.461 -0.346 -0.299 -0.0487 17.8 49.56 4268 -- --
32.69 0.266 11.7 -0.502 0.371 -0.538 -0.34 -- -0.0453 17.8 50 4268 -- --
32.82 0.267 11.7 -0.517 0.349 -0.45 -- -0.31 -0.0475 17.5 49.69 4276 -- --
32.23 0.264 11.7 -0.508 0.374 -0.835 -- -- -0.0372 17.4 49.99 4900 -- --
39.16 0.291 11.7 -0.524 -- -0.477 -- -0.244 -0.0603 -- 49.01 4262 -- --
38.55 0.291 11.7 -0.719 0.363 -- -0.224 -- 0.00254 17.5 -- -- -- --
38.64 0.291 11.7 -0.718 0.361 -- -- -- 0.00178 17.2 -- -- -- --
39.09 0.291 11.7 -0.53 -- -0.739 -- -- -0.0492 -- 49 5482 -- --
37.93 0.287 11.7 -- 0.36 -0.798 -- -- -0.0113 17.6 48.69 4297 -- --
45.46 0.315 11.7 -0.73 -- -- -- -- -0.00727 -- -- -- -- --
52.22 0.338 11.7 -- 0.374 -- -- -- 0.0817 17.2 -- -- -- --
44.46 0.311 11.7 -- -- -0.805 -- -- -0.0322 -- 49 4276 -- --
59.53 0.36 11.7 -- -- -- -- -- 0.0738 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.90 wind 9.0 14400 < th dose independent rect. 4 8
3 31.14 wind 9.0 14400 < th dose independent rect. 1 11
5 31.30 wind 9.0 14400 > th dose independent rect. 4 8
6 31.36 wind 9.0 14400 > th dose dependent rect. 4 9
7 31.37 wind 9.0 14400 > th dose dependent rect. 1 12
10 31.39 wind 9.0 14400 > th dose independent rect. 1 11
20 31.55 wind 1.0 43200 > th dose independent rect. 2 1
23 31.64 humidity 50.0 4320 < th dose independent rect. 15 2
24 31.64 wind 9.0 14400 < th dose independent rect. 21 15
33 31.72 wind 9.0 14400 < th dose independent sin 7 NA
42 31.77 radiation 1.0 4320 < th dose dependent rect. 6 3
50 31.93 wind 9.0 14400 > th dose independent sin 7 NA
51 31.94 atmosphere 1005.0 43200 < th dose independent rect. 22 2
52 31.97 humidity 50.0 4320 < th dose dependent sin 12 NA
56 31.99 wind 1.0 43200 < th dose dependent rect. 2 1
58 32.01 humidity 50.0 4320 < th dose independent sin 14 NA
85 32.09 precipitation 0.1 14400 > th dose independent rect. 5 8
98 32.10 temperature 25.0 14400 > th dose independent rect. 11 1
100 32.10 precipitation 0.1 14400 > th dose dependent rect. 5 8
101 32.11 precipitation 0.1 14400 < th dose independent rect. 5 7
102 32.11 precipitation 0.1 14400 < th dose dependent rect. 5 7
110 32.16 atmosphere 1000.0 10 > th dose independent rect. 17 13
113 32.18 radiation 1.0 4320 < th dose dependent rect. 6 6
122 32.23 temperature 25.0 14400 < th dose independent rect. 11 1
127 32.25 wind 9.0 14400 > th dose dependent sin 7 NA
150 32.28 radiation 1.0 4320 > th dose independent rect. 6 6
151 32.28 radiation 1.0 4320 < th dose independent rect. 6 6
152 32.30 wind 1.0 43200 < th dose independent rect. 2 1
157 32.31 atmosphere 995.0 10 > th dose dependent rect. 17 13
164 32.34 atmosphere 1005.0 43200 > th dose independent rect. 11 1
165 32.34 atmosphere 1005.0 43200 < th dose independent rect. 11 1
182 32.37 wind 9.0 43200 > th dose independent rect. 9 5
189 32.41 humidity 50.0 4320 < th dose dependent rect. 14 4
218 32.45 temperature 25.0 14400 < th dose dependent rect. 9 1
220 32.46 radiation 10.0 43200 > th dose independent rect. 17 1
233 32.46 wind 9.0 14400 > th dose dependent rect. 11 1
234 32.46 atmosphere 1015.0 10 < th dose dependent rect. 12 15
241 32.49 precipitation 0.1 14400 > th dose dependent rect. 6 4
295 32.56 humidity 50.0 4320 < th dose independent rect. 15 23
335 32.62 humidity 50.0 4320 < th dose independent no NA NA
464 32.63 radiation 20.0 43200 < th dose independent rect. 18 12
470 32.64 wind 9.0 43200 > th dose dependent rect. 10 5
474 32.65 wind 9.0 43200 < th dose independent rect. 9 5
489 32.68 humidity 50.0 4320 > th dose independent rect. 15 2
490 32.68 atmosphere 1000.0 720 > th dose independent rect. 17 2
497 32.69 atmosphere 1005.0 43200 < th dose independent rect. 1 1
515 32.71 humidity 50.0 4320 > th dose independent sin 15 NA
522 32.72 radiation 40.0 43200 < th dose independent rect. 10 1
524 32.72 wind 9.0 14400 < th dose independent rect. 9 3
538 32.74 wind 9.0 14400 < th dose independent rect. 11 1
547 32.75 temperature 20.0 14400 < th dose independent rect. 7 1
548 32.75 wind 9.0 43200 < th dose independent rect. 24 3
551 32.75 humidity 50.0 4320 > th dose independent rect. 12 6
561 32.76 humidity 50.0 4320 > th dose independent rect. 12 15
566 32.77 atmosphere 1005.0 43200 > th dose independent rect. 22 1
573 32.77 humidity 50.0 4320 > th dose independent rect. 12 13
577 32.77 humidity 50.0 4320 > th dose independent rect. 12 21
578 32.77 atmosphere 995.0 720 > th dose dependent rect. 18 1
639 32.81 temperature 20.0 14400 > th dose independent rect. 7 1
649 32.82 wind 9.0 43200 > th dose independent sin 3 NA
657 32.83 atmosphere 1005.0 43200 > th dose independent rect. 1 1
658 32.83 wind 9.0 43200 > th dose independent rect. 10 3
703 32.87 atmosphere 995.0 270 > th dose dependent rect. 15 5
705 32.88 radiation 40.0 43200 > th dose independent rect. 10 1
724 32.90 atmosphere 1005.0 43200 > th dose independent rect. 3 1
776 32.93 humidity 50.0 4320 > th dose independent rect. 16 22
778 32.94 atmosphere 1005.0 43200 > th dose independent rect. 1 3
797 32.95 atmosphere 995.0 270 > th dose dependent rect. 14 7
813 32.97 atmosphere 1005.0 43200 > th dose independent rect. 22 6
830 32.99 atmosphere 1005.0 43200 < th dose independent rect. 3 1
837 33.00 wind 9.0 14400 > th dose independent rect. 11 1
879 33.03 atmosphere 995.0 43200 < th dose independent rect. 16 6
900 33.05 wind 9.0 43200 < th dose independent rect. 5 1
907 33.05 atmosphere 995.0 43200 < th dose dependent rect. 16 6
911 33.06 wind 7.0 4320 > th dose independent rect. 24 1
915 33.06 wind 7.0 4320 > th dose dependent rect. 24 1
932 33.08 temperature 20.0 720 > th dose independent rect. 6 1
946 33.10 precipitation 0.1 14400 < th dose independent rect. 9 2
952 33.10 precipitation 0.1 14400 < th dose dependent rect. 9 2
966 33.12 humidity 50.0 4320 > th dose independent rect. 8 10
972 33.12 humidity 50.0 4320 > th dose independent rect. 24 18
977 33.12 humidity 50.0 4320 > th dose independent rect. 7 21
984 33.13 radiation 30.0 43200 < th dose independent rect. 17 7
996 33.13 humidity 50.0 4320 > th dose independent rect. 3 15