Os01g0165800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0165800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.96 | 0.467 | 7.43 | -1.16 | 1 | 0.64 | 0.213 | -1.04 | 0.205 | 17.1 | 19.1 | 2570 | -- | -- |
| 99.68 | 0.465 | 7.4 | -1.15 | 0.997 | 1 | 0.335 | -- | 0.204 | 17.1 | 18.7 | 3934 | -- | -- |
| 99.07 | 0.464 | 7.43 | -1.17 | 1 | 0.64 | -- | -1.07 | 0.204 | 17.1 | 19.02 | 2581 | -- | -- |
| 99.75 | 0.465 | 7.41 | -1.17 | 1.01 | 1.04 | -- | -- | 0.191 | 17.1 | 18.47 | 3933 | -- | -- |
| 150.35 | 0.571 | 7.41 | -1.14 | -- | 0.672 | -- | -1.05 | 0.187 | -- | 19.1 | 2139 | -- | -- |
| 113.15 | 0.499 | 7.36 | -0.612 | 0.971 | -- | 0.42 | -- | 0.408 | 17.2 | -- | -- | -- | -- |
| 113.59 | 0.499 | 7.36 | -0.612 | 0.973 | -- | -- | -- | 0.41 | 17.2 | -- | -- | -- | -- |
| 151.16 | 0.573 | 7.38 | -1.1 | -- | 0.887 | -- | -- | 0.21 | -- | 18.8 | 3480 | -- | -- |
| 122.74 | 0.519 | 7.34 | -- | 0.978 | 0.21 | -- | -- | 0.468 | 17.2 | 18.47 | 3933 | -- | -- |
| 163.13 | 0.597 | 7.34 | -0.646 | -- | -- | -- | -- | 0.386 | -- | -- | -- | -- | -- |
| 123.47 | 0.52 | 7.34 | -- | 0.984 | -- | -- | -- | 0.479 | 17.2 | -- | -- | -- | -- |
| 155.76 | 0.583 | 7.35 | -- | -- | 0.423 | -- | -- | 0.339 | -- | 26.12 | 22848 | -- | -- |
| 174.15 | 0.616 | 7.33 | -- | -- | -- | -- | -- | 0.458 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.91 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 2 | 93.49 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 3 | 93.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 5 | 93.60 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 6 | 93.63 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 8 | 93.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 13 | 93.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 17 | 93.90 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 19 | 93.94 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 21 | 93.99 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 23 | 94.02 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 33 | 94.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 36 | 94.24 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 53 | 94.44 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 58 | 94.49 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 60 | 94.49 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 62 | 94.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 63 | 94.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 66 | 94.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 67 | 94.58 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 69 | 94.60 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 73 | 94.64 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 74 | 94.65 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 76 | 94.67 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 77 | 94.68 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 91 | 94.82 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 97 | 94.87 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 99 | 94.89 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 109 | 94.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 110 | 94.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 111 | 94.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 115 | 95.02 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 123 | 95.05 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 124 | 95.06 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 127 | 95.07 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 140 | 95.18 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 152 | 95.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 196 | 95.46 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 207 | 95.52 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 208 | 95.52 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 231 | 95.61 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 235 | 95.62 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 248 | 95.67 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 253 | 95.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 255 | 95.70 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 258 | 95.70 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 260 | 95.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 265 | 95.72 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 285 | 95.81 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 322 | 95.91 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 330 | 95.93 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 335 | 95.96 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 337 | 95.96 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 349 | 95.99 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 354 | 96.01 | wind | 1.0 | 14400 | < th | dose independent | rect. | 24 | 2 |
| 369 | 96.03 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 370 | 96.03 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 379 | 96.04 | wind | 9.0 | 43200 | > th | dose independent | rect. | 21 | 17 |
| 393 | 96.08 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 409 | 96.10 | wind | 9.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 413 | 96.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 421 | 96.13 | wind | 9.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 435 | 96.14 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 7 |
| 439 | 96.14 | wind | 9.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 449 | 96.15 | wind | 9.0 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 450 | 96.15 | wind | 9.0 | 43200 | > th | dose independent | rect. | 1 | 13 |
| 462 | 96.16 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 477 | 96.19 | humidity | 90.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 502 | 96.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 506 | 96.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 10 |
| 510 | 96.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 516 | 96.25 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 525 | 96.26 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 532 | 96.27 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 546 | 96.28 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 556 | 96.29 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 558 | 96.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 19 |
| 568 | 96.31 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 638 | 96.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 642 | 96.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 667 | 96.44 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 9 |
| 693 | 96.47 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 778 | 96.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 781 | 96.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 782 | 96.58 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 807 | 96.61 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 827 | 96.64 | wind | 9.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 892 | 96.71 | wind | 9.0 | 43200 | < th | dose independent | sin | 5 | NA |
| 908 | 96.72 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 19 |
| 963 | 96.76 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 21 | 16 |