Os01g0164800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0164800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.28 | 0.536 | 5.45 | -1.11 | 0.569 | -1.28 | -0.484 | 4.74 | -0.0807 | 10.2 | 25.02 | 4081 | -- | -- |
| 138.97 | 0.549 | 5.52 | -1.61 | 0.684 | -1.41 | -0.566 | -- | -0.0752 | 10.7 | 21.2 | 10554 | -- | -- |
| 131.13 | 0.533 | 5.44 | -1.1 | 0.568 | -1.29 | -- | 4.86 | -0.0722 | 10 | 25.03 | 4059 | -- | -- |
| 139.54 | 0.55 | 5.54 | -1.65 | 0.665 | -1.49 | -- | -- | -0.13 | 10.3 | 20.2 | 10197 | -- | -- |
| 148.25 | 0.567 | 5.44 | -0.973 | -- | -1.46 | -- | 5.11 | 0.00896 | -- | 25.04 | 3776 | -- | -- |
| 172.08 | 0.615 | 5.66 | -2.76 | 0.672 | -- | -0.711 | -- | -0.633 | 10.7 | -- | -- | -- | -- |
| 174.07 | 0.618 | 5.66 | -2.79 | 0.68 | -- | -- | -- | -0.637 | 10.5 | -- | -- | -- | -- |
| 164.6 | 0.598 | 5.54 | -0.979 | -- | -1.88 | -- | -- | 0.000389 | -- | 19.5 | 21150 | -- | -- |
| 149.61 | 0.57 | 5.51 | -- | 0.623 | -2.2 | -- | -- | 0.23 | 10.8 | 18.5 | 41588 | -- | -- |
| 202.38 | 0.665 | 5.68 | -2.8 | -- | -- | -- | -- | -0.64 | -- | -- | -- | -- | -- |
| 379.36 | 0.911 | 5.59 | -- | 0.699 | -- | -- | -- | -0.326 | 10.8 | -- | -- | -- | -- |
| 173.05 | 0.613 | 5.48 | -- | -- | -2.53 | -- | -- | 0.236 | -- | 18 | 47520 | -- | -- |
| 409.56 | 0.945 | 5.61 | -- | -- | -- | -- | -- | -0.329 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.66 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 11 |
| 6 | 128.30 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 11 |
| 10 | 128.68 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 19 | 129.04 | temperature | 25 | 1440 | < th | dose independent | sin | 14 | NA |
| 28 | 129.49 | temperature | 25 | 1440 | > th | dose independent | sin | 14 | NA |
| 36 | 129.71 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 18 |
| 49 | 130.03 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 18 |
| 126 | 130.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 152 | 131.03 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 23 |
| 193 | 131.30 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 22 |
| 206 | 131.37 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 216 | 131.42 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 23 |
| 223 | 131.44 | temperature | 25 | 4320 | > th | dose independent | no | NA | NA |
| 252 | 131.58 | temperature | 25 | 4320 | > th | dose independent | rect. | 14 | 23 |
| 255 | 131.59 | temperature | 25 | 4320 | > th | dose independent | rect. | 4 | 23 |
| 257 | 131.59 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 23 |
| 271 | 131.64 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 280 | 131.66 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 285 | 131.69 | temperature | 25 | 4320 | < th | dose independent | no | NA | NA |
| 324 | 131.82 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 23 |
| 330 | 131.83 | temperature | 20 | 4320 | > th | dose dependent | rect. | 15 | 7 |
| 334 | 131.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 14 | 23 |
| 443 | 132.10 | temperature | 20 | 4320 | > th | dose dependent | rect. | 11 | 16 |
| 461 | 132.15 | temperature | 20 | 4320 | > th | dose dependent | sin | 17 | NA |
| 560 | 132.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 603 | 132.47 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 659 | 132.60 | temperature | 25 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 748 | 132.83 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 753 | 132.84 | temperature | 25 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 769 | 132.87 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 845 | 133.00 | humidity | 80 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 865 | 133.04 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 875 | 133.05 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 21 |
| 877 | 133.06 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 914 | 133.12 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 922 | 133.12 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 23 |
| 923 | 133.13 | humidity | 80 | 43200 | < th | dose dependent | rect. | 24 | 9 |
| 940 | 133.15 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 23 |