Os01g0164700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF410 family protein.
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Os01g0164700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF410 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.92 | 0.181 | 10.9 | -0.126 | 0.162 | -0.841 | -0.459 | -0.435 | 0.138 | 0.54 | 15.52 | 226 | -- | -- |
| 15.06 | 0.181 | 10.9 | -0.0654 | 0.165 | -0.86 | -0.397 | -- | 0.153 | 0.347 | 15.27 | 228 | -- | -- |
| 15.67 | 0.184 | 10.9 | -0.0838 | 0.168 | -0.753 | -- | -0.0846 | 0.139 | 1.41 | 17.19 | 199 | -- | -- |
| 15.63 | 0.184 | 10.9 | -0.0547 | 0.157 | -0.762 | -- | -- | 0.154 | 1.46 | 17.22 | 194 | -- | -- |
| 16.43 | 0.189 | 10.8 | 0.0229 | -- | -0.847 | -- | 0.312 | 0.191 | -- | 18.55 | 113 | -- | -- |
| 23.2 | 0.226 | 10.9 | -0.232 | 0.387 | -- | -0.152 | -- | 0.0322 | 2.97 | -- | -- | -- | -- |
| 23.27 | 0.226 | 10.9 | -0.229 | 0.387 | -- | -- | -- | 0.033 | 3.07 | -- | -- | -- | -- |
| 16.46 | 0.189 | 10.8 | -0.023 | -- | -0.89 | -- | -- | 0.178 | -- | 17.48 | 114 | -- | -- |
| 15.7 | 0.185 | 10.9 | -- | 0.15 | -0.785 | -- | -- | 0.163 | 1.32 | 17.19 | 195 | -- | -- |
| 31.84 | 0.264 | 10.9 | -0.213 | -- | -- | -- | -- | 0.0431 | -- | -- | -- | -- | -- |
| 24.65 | 0.232 | 10.9 | -- | 0.383 | -- | -- | -- | 0.0586 | 3.07 | -- | -- | -- | -- |
| 16.47 | 0.189 | 10.8 | -- | -- | -0.9 | -- | -- | 0.181 | -- | 17.4 | 113 | -- | -- |
| 33.03 | 0.268 | 10.9 | -- | -- | -- | -- | -- | 0.0667 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 11 | 14.82 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 24 | 14.98 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 53 | 15.24 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 66 | 15.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 70 | 15.44 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 109 | 15.63 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 122 | 15.73 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 132 | 15.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 134 | 15.77 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 382 | 16.24 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 15 |
| 390 | 16.25 | temperature | 15 | 270 | > th | dose dependent | sin | 1 | NA |
| 684 | 16.48 | temperature | 15 | 90 | > th | dose dependent | sin | 23 | NA |
| 966 | 16.66 | temperature | 25 | 720 | > th | dose dependent | sin | 7 | NA |