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Os01g0157900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function Cys-rich family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0156) R2 : 0.0303
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.124 (0.0328) R2dN8 : 0.0391 R2N8 : 0.0303
σ : 0.293
deviance : 39.45
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
28.65 0.251 12.2 0.39 0.121 0.392 -0.102 0.0292 -0.0391 16.7 30.7 369 -- --
28.65 0.249 12.2 0.389 0.121 0.395 -0.101 -- -0.0391 16.7 30.7 368 -- --
28.68 0.249 12.2 0.385 0.122 0.394 -- -0.0478 -0.0399 16.6 30.66 371 -- --
28.68 0.249 12.2 0.389 0.122 0.39 -- -- -0.04 16.6 30.69 372 -- --
29.34 0.252 12.2 0.401 -- 0.399 -- 0.427 -0.0355 -- 30.6 367 -- --
31.79 0.264 12.2 0.435 0.231 -- 0.127 -- -0.071 17.2 -- -- -- --
31.83 0.264 12.2 0.435 0.232 -- -- -- -0.0704 17.2 -- -- -- --
29.32 0.252 12.2 0.383 -- 0.449 -- -- -0.0375 -- 30.5 367 -- --
32.56 0.266 12.2 -- 0.095 0.444 -- -- -0.0784 16.4 30.42 374 -- --
34.63 0.275 12.2 0.427 -- -- -- -- -0.0762 -- -- -- -- --
36.82 0.284 12.2 -- 0.224 -- -- -- -0.119 17.3 -- -- -- --
32.96 0.267 12.2 -- -- 0.492 -- -- -0.0755 -- 30.38 368 -- --
39.45 0.293 12.2 -- -- -- -- -- -0.124 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.89 temperature 10.0 10 > th dose dependent rect. 6 14
3 26.23 temperature 20.0 270 > th dose dependent rect. 4 3
4 26.30 temperature 30.0 270 < th dose independent rect. 7 21
6 26.42 temperature 20.0 270 > th dose independent rect. 4 3
10 26.50 temperature 30.0 270 < th dose independent rect. 8 19
12 26.52 temperature 20.0 30 > th dose independent rect. 6 14
17 26.59 temperature 20.0 270 > th dose dependent rect. 3 5
19 26.77 temperature 20.0 270 > th dose independent rect. 3 5
50 27.05 temperature 20.0 10 > th dose dependent rect. 6 3
52 27.07 humidity 60.0 270 > th dose independent rect. 7 21
64 27.20 humidity 60.0 270 > th dose independent rect. 8 19
67 27.23 temperature 25.0 10 > th dose independent rect. 6 3
86 27.30 wind 7.0 10 < th dose independent rect. 20 10
89 27.31 temperature 30.0 270 < th dose independent rect. 7 10
91 27.32 radiation 20.0 10 < th dose dependent rect. 20 10
109 27.44 temperature 30.0 10 < th dose independent rect. 11 19
129 27.53 temperature 10.0 10 > th dose independent rect. 20 10
130 27.53 temperature 30.0 10 < th dose independent rect. 20 10
131 27.53 humidity 50.0 10 > th dose independent rect. 20 10
134 27.53 atmosphere 995.0 10 > th dose independent rect. 20 10
135 27.53 radiation 20.0 10 < th dose independent rect. 20 10
138 27.53 temperature 10.0 10 > th dose independent rect. 6 14
140 27.53 atmosphere 1015.0 10 < th dose independent rect. 6 14
162 27.63 radiation 10.0 270 < th dose independent rect. 5 2
181 27.66 wind 9.0 30 < th dose independent rect. 6 14
186 27.67 humidity 80.0 270 > th dose independent rect. 4 3
189 27.67 precipitation 0.1 10 < th dose independent rect. 20 10
194 27.67 precipitation 0.1 10 < th dose dependent rect. 20 10
196 27.68 precipitation 0.1 10 < th dose independent rect. 6 14
199 27.68 precipitation 0.1 10 < th dose dependent rect. 6 14
201 27.70 temperature 10.0 1440 > th dose independent rect. 21 10
204 27.70 temperature 30.0 1440 < th dose independent rect. 21 10
208 27.70 humidity 50.0 1440 > th dose independent rect. 21 10
213 27.70 atmosphere 995.0 1440 > th dose independent rect. 21 10
214 27.70 radiation 40.0 1440 < th dose independent rect. 21 10
219 27.70 temperature 10.0 1440 > th dose independent rect. 7 14
241 27.75 atmosphere 1015.0 10 < th dose independent rect. 20 10
247 27.77 radiation 20.0 10 < th dose independent rect. 6 3
249 27.78 radiation 40.0 10 < th dose dependent rect. 6 3
261 27.84 wind 1.0 10 > th dose independent rect. 6 14
262 27.84 precipitation 0.1 270 < th dose independent rect. 7 21
264 27.84 precipitation 0.1 270 < th dose dependent rect. 7 21
265 27.85 humidity 70.0 30 > th dose independent rect. 6 3
269 27.85 atmosphere 995.0 30 > th dose independent rect. 9 21
274 27.86 radiation 1.0 90 > th dose independent rect. 18 15
276 27.86 precipitation 0.1 30 < th dose independent rect. 9 21
278 27.86 precipitation 0.1 30 < th dose dependent rect. 9 21
279 27.87 humidity 70.0 270 > th dose independent rect. 18 10
320 27.96 radiation 40.0 10 < th dose dependent rect. 6 5
325 27.97 wind 7.0 270 < th dose independent rect. 7 21
330 27.98 radiation 1.0 90 < th dose dependent sin 10 NA
332 27.98 atmosphere 995.0 10 > th dose dependent rect. 6 3
336 28.00 wind 1.0 10 > th dose independent rect. 6 3
337 28.00 atmosphere 995.0 10 > th dose independent rect. 9 8
344 28.01 temperature 30.0 270 < th dose independent rect. 17 10
352 28.02 precipitation 0.1 90 < th dose independent rect. 7 23
353 28.02 precipitation 0.1 90 < th dose dependent rect. 7 23
359 28.04 wind 7.0 10 < th dose independent rect. 6 3
362 28.04 temperature 10.0 10 > th dose independent rect. 6 3
366 28.04 temperature 30.0 10 < th dose independent rect. 6 3
368 28.04 humidity 50.0 10 > th dose independent rect. 6 3
372 28.04 atmosphere 995.0 10 > th dose independent rect. 6 3
374 28.04 atmosphere 1015.0 10 < th dose independent rect. 6 3
382 28.04 wind 9.0 10 < th dose independent rect. 9 21
383 28.04 temperature 10.0 10 > th dose independent rect. 9 21
391 28.04 humidity 50.0 270 > th dose dependent rect. 8 19
396 28.05 temperature 10.0 1440 > th dose independent rect. 7 3
399 28.05 atmosphere 995.0 1440 > th dose independent rect. 7 3
400 28.05 atmosphere 1015.0 1440 < th dose independent rect. 7 3
405 28.05 temperature 10.0 1440 > th dose independent rect. 10 21
410 28.05 radiation 1.0 90 < th dose dependent rect. 20 15
411 28.06 precipitation 0.1 10 < th dose independent rect. 6 3
415 28.06 wind 7.0 270 < th dose independent rect. 18 10
418 28.06 wind 9.0 10 < th dose dependent rect. 6 3
419 28.06 humidity 50.0 30 > th dose dependent rect. 6 3
420 28.06 precipitation 0.1 10 < th dose dependent rect. 6 3
431 28.07 temperature 10.0 30 > th dose dependent rect. 20 10
440 28.09 humidity 50.0 270 > th dose independent rect. 7 10
451 28.10 atmosphere 995.0 270 > th dose dependent rect. 4 3
454 28.11 radiation 1.0 90 > th dose independent sin 11 NA
466 28.12 atmosphere 1015.0 10 < th dose independent rect. 9 21
476 28.13 radiation 1.0 90 < th dose dependent rect. 20 19
477 28.14 radiation 1.0 90 < th dose independent sin 11 NA
495 28.15 wind 9.0 10 < th dose dependent rect. 20 10
498 28.16 radiation 1.0 90 > th dose independent rect. 5 4
507 28.17 temperature 30.0 10 < th dose independent rect. 9 8
537 28.20 radiation 30.0 270 < th dose dependent rect. 4 3
549 28.21 humidity 50.0 270 > th dose dependent rect. 4 3
553 28.22 wind 9.0 270 < th dose independent rect. 4 3
554 28.22 temperature 10.0 270 > th dose independent rect. 4 3
557 28.22 temperature 30.0 270 < th dose independent rect. 4 3
558 28.22 humidity 50.0 270 > th dose independent rect. 4 3
560 28.22 atmosphere 995.0 270 > th dose independent rect. 4 3
561 28.22 atmosphere 1015.0 270 < th dose independent rect. 4 3
566 28.22 wind 5.0 90 < th dose independent rect. 9 20
567 28.22 temperature 10.0 270 > th dose independent rect. 7 21
568 28.22 humidity 50.0 30 > th dose independent rect. 9 21
574 28.23 atmosphere 995.0 270 > th dose independent rect. 7 8
577 28.23 radiation 30.0 90 < th dose independent rect. 17 16
601 28.26 precipitation 0.1 270 < th dose independent rect. 4 3
606 28.26 precipitation 0.1 270 < th dose dependent rect. 4 3
615 28.27 radiation 40.0 10 < th dose independent rect. 17 16
624 28.29 humidity 90.0 30 < th dose independent rect. 6 3
635 28.30 wind 9.0 270 < th dose independent rect. 7 8
651 28.31 atmosphere 995.0 270 > th dose independent rect. 7 21
652 28.31 radiation 40.0 10 < th dose dependent rect. 6 14
666 28.33 temperature 10.0 270 > th dose independent rect. 7 8
667 28.33 temperature 10.0 10 > th dose independent rect. 9 8
669 28.33 atmosphere 1015.0 270 < th dose independent rect. 7 8
670 28.33 atmosphere 1015.0 10 < th dose independent rect. 9 8
671 28.33 precipitation 0.1 10 < th dose independent rect. 9 8
681 28.33 radiation 1.0 270 < th dose independent rect. 18 10
684 28.33 temperature 10.0 270 > th dose independent rect. 15 16
685 28.33 temperature 10.0 10 > th dose independent rect. 17 16
693 28.33 precipitation 0.1 10 < th dose dependent rect. 9 8
698 28.34 temperature 30.0 720 < th dose independent rect. 9 2
713 28.34 radiation 40.0 270 < th dose independent rect. 15 16
721 28.34 wind 9.0 90 < th dose dependent rect. 9 8
727 28.35 wind 1.0 90 > th dose independent rect. 6 1
729 28.35 atmosphere 1005.0 270 < th dose independent rect. 17 1
738 28.35 atmosphere 995.0 10 > th dose independent rect. 6 14
746 28.35 radiation 1.0 270 < th dose dependent rect. 18 10
749 28.36 precipitation 0.1 270 < th dose independent rect. 7 8
752 28.36 precipitation 0.1 270 < th dose independent rect. 18 10
758 28.36 precipitation 0.1 270 < th dose dependent rect. 7 8
760 28.36 precipitation 0.1 270 < th dose dependent rect. 18 10
768 28.37 radiation 1.0 90 < th dose independent rect. 20 15
786 28.38 radiation 30.0 90 < th dose dependent rect. 6 1
798 28.39 wind 9.0 10 < th dose independent rect. 9 8
822 28.40 temperature 30.0 270 < th dose independent rect. 13 14
842 28.41 atmosphere 995.0 10 > th dose independent rect. 17 16
844 28.41 temperature 30.0 270 < th dose independent rect. 18 23
861 28.42 atmosphere 1015.0 270 < th dose independent rect. 7 20
874 28.43 wind 9.0 10 < th dose independent rect. 17 16
875 28.43 atmosphere 995.0 90 > th dose independent rect. 7 23
879 28.43 wind 9.0 90 < th dose dependent rect. 9 20
884 28.44 wind 1.0 10 > th dose independent rect. 9 8
901 28.45 humidity 50.0 90 > th dose dependent rect. 6 1
911 28.46 wind 7.0 90 < th dose independent rect. 6 1
913 28.46 temperature 10.0 90 > th dose independent rect. 6 1
915 28.46 temperature 30.0 90 < th dose independent rect. 6 1
916 28.46 humidity 50.0 90 > th dose independent rect. 6 1
918 28.46 atmosphere 995.0 90 > th dose independent rect. 6 1
919 28.46 atmosphere 1015.0 90 < th dose independent rect. 6 1
922 28.46 humidity 50.0 4320 > th dose independent rect. 7 3
928 28.46 radiation 10.0 30 < th dose independent rect. 6 14
935 28.46 temperature 10.0 90 > th dose independent rect. 7 23
950 28.47 precipitation 0.1 90 < th dose independent rect. 6 1
959 28.47 precipitation 0.1 90 < th dose dependent rect. 6 1
987 28.49 temperature 15.0 4320 > th dose independent rect. 7 1