Os01g0157200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0157200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.06 | 0.345 | 3.31 | 0.203 | 0.209 | 0.261 | -0.295 | 1.35 | -0.0724 | 6.82 | 91.09 | 5892 | -- | -- |
| 56.44 | 0.35 | 3.31 | 0.113 | 0.247 | 0.329 | -0.325 | -- | -0.116 | 6.65 | 97.19 | 4788 | -- | -- |
| 54.27 | 0.343 | 3.31 | 0.201 | 0.209 | 0.261 | -- | 1.37 | -0.0706 | 6.83 | 91.07 | 5913 | -- | -- |
| 56.7 | 0.351 | 3.31 | 0.106 | 0.246 | 0.329 | -- | -- | -0.115 | 6.84 | 158.1 | 4800 | -- | -- |
| 56.54 | 0.35 | 3.31 | 0.209 | -- | 0.262 | -- | 1.35 | -0.0727 | -- | 91 | 5833 | -- | -- |
| 57.83 | 0.357 | 3.29 | 0.0914 | 0.208 | -- | -0.316 | -- | -0.0401 | 6.73 | -- | -- | -- | -- |
| 58.07 | 0.357 | 3.29 | 0.0868 | 0.207 | -- | -- | -- | -0.0389 | 6.96 | -- | -- | -- | -- |
| 59.08 | 0.358 | 3.31 | 0.114 | -- | 0.299 | -- | -- | -0.102 | -- | 132.6 | 5705 | -- | -- |
| 56.99 | 0.352 | 3.31 | -- | 0.246 | 0.318 | -- | -- | -0.123 | 6.8 | 138.6 | 4790 | -- | -- |
| 60.33 | 0.363 | 3.3 | 0.091 | -- | -- | -- | -- | -0.0351 | -- | -- | -- | -- | -- |
| 58.27 | 0.357 | 3.29 | -- | 0.208 | -- | -- | -- | -0.0486 | 6.94 | -- | -- | -- | -- |
| 59.29 | 0.359 | 3.31 | -- | -- | 0.318 | -- | -- | -0.113 | -- | 156.4 | 4287 | -- | -- |
| 60.55 | 0.363 | 3.3 | -- | -- | -- | -- | -- | -0.0452 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.99 | humidity | 80.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 3 | 49.11 | radiation | 10.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 4 | 49.32 | humidity | 80.0 | 10 | < th | dose independent | rect. | 4 | 4 |
| 6 | 49.46 | humidity | 80.0 | 10 | < th | dose independent | rect. | 23 | 9 |
| 34 | 50.84 | radiation | 10.0 | 10 | > th | dose independent | rect. | 16 | 16 |
| 36 | 51.01 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 56 | 53.16 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 3 | 6 |
| 60 | 53.27 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 62 | 53.32 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 63 | 53.33 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 8 | 23 |
| 71 | 53.41 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 80 | 53.48 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 84 | 53.58 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 87 | 53.65 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 88 | 53.66 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 99 | 53.77 | wind | 5.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 101 | 53.82 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 111 | 53.82 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 112 | 53.84 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 116 | 53.85 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 139 | 53.93 | wind | 3.0 | 30 | < th | dose independent | rect. | 7 | 1 |
| 153 | 54.04 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 167 | 54.08 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 23 | 16 |
| 181 | 54.11 | wind | 1.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 200 | 54.15 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 201 | 54.15 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 6 | 8 |
| 211 | 54.16 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 215 | 54.16 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 233 | 54.17 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 16 |
| 238 | 54.18 | humidity | 50.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 255 | 54.19 | humidity | 50.0 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 261 | 54.20 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 291 | 54.23 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 3 | 8 |
| 318 | 54.24 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 352 | 54.26 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 356 | 54.27 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 359 | 54.27 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 384 | 54.28 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 394 | 54.29 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 443 | 54.31 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 470 | 54.32 | humidity | 70.0 | 4320 | > th | dose independent | sin | 3 | NA |
| 619 | 54.38 | radiation | 10.0 | 10 | > th | dose independent | sin | 11 | NA |
| 621 | 54.38 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 627 | 54.38 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 644 | 54.39 | humidity | 80.0 | 4320 | < th | dose independent | sin | 3 | NA |
| 708 | 54.40 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 725 | 54.41 | temperature | 10.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 729 | 54.41 | temperature | 30.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 731 | 54.41 | humidity | 50.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 735 | 54.41 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 7 | 1 |
| 737 | 54.41 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 761 | 54.41 | temperature | 10.0 | 10 | > th | dose independent | rect. | 8 | 23 |
| 765 | 54.41 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 786 | 54.42 | wind | 9.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 789 | 54.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 794 | 54.42 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 796 | 54.42 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 799 | 54.42 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 807 | 54.42 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 832 | 54.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 15 | 8 |
| 837 | 54.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 16 |
| 839 | 54.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |