Os01g0155600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Splicing factor RSZ33.
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Os01g0155600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Splicing factor RSZ33.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.47 | 0.191 | 13 | 0.9 | 0.471 | -0.296 | 0.5 | 0.462 | 0.506 | 22.3 | 10.04 | 1444 | -- | -- |
| 16.89 | 0.191 | 13 | 0.869 | 0.472 | -0.271 | 0.504 | -- | 0.49 | 22.2 | 10.04 | 1476 | -- | -- |
| 17.05 | 0.192 | 13 | 0.918 | 0.541 | -0.282 | -- | 0.94 | 0.501 | 22.4 | 10.14 | 1225 | -- | -- |
| 17.81 | 0.197 | 13 | 0.803 | 0.469 | -0.274 | -- | -- | 0.477 | 22.4 | 10.04 | 1476 | -- | -- |
| 23.95 | 0.229 | 13 | 0.752 | -- | -0.297 | -- | -0.205 | 0.382 | -- | 10.04 | 1626 | -- | -- |
| 19.15 | 0.205 | 13 | 0.735 | 0.468 | -- | 0.467 | -- | 0.391 | 22.2 | -- | -- | -- | -- |
| 20.02 | 0.21 | 13 | 0.716 | 0.465 | -- | -- | -- | 0.39 | 22.3 | -- | -- | -- | -- |
| 20.69 | 0.213 | 13 | 0.709 | -- | -0.336 | -- | -- | 0.419 | -- | 3.72 | 1587 | -- | -- |
| 28.42 | 0.248 | 13 | -- | 0.545 | -0.455 | -- | -- | 0.314 | 23.2 | 80 | 1305 | -- | -- |
| 33.2 | 0.269 | 13 | 0.723 | -- | -- | -- | -- | 0.391 | -- | -- | -- | -- | -- |
| 33.54 | 0.271 | 13.1 | -- | 0.469 | -- | -- | -- | 0.31 | 22.4 | -- | -- | -- | -- |
| 33.96 | 0.272 | 13 | -- | -- | -0.343 | -- | -- | 0.341 | -- | 3.72 | 1587 | -- | -- |
| 47 | 0.32 | 13 | -- | -- | -- | -- | -- | 0.311 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.39 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 3 | 15.51 | radiation | 10 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 8 | 15.64 | radiation | 10 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 11 | 15.69 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 18 | 15.77 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 37 | 15.83 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 44 | 15.87 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 64 | 15.93 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 24 | 9 |
| 73 | 15.96 | radiation | 10 | 1440 | < th | dose dependent | sin | 21 | NA |
| 100 | 16.00 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 24 | 9 |
| 101 | 16.01 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 118 | 16.04 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 138 | 16.07 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 157 | 16.10 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 4 |
| 178 | 16.13 | radiation | 10 | 1440 | < th | dose independent | rect. | 12 | 4 |
| 181 | 16.14 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 4 |
| 191 | 16.16 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 274 | 16.21 | wind | 1 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 336 | 16.26 | radiation | 10 | 1440 | > th | dose independent | sin | 23 | NA |
| 408 | 16.29 | humidity | 90 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 414 | 16.30 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 431 | 16.31 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 18 |
| 456 | 16.33 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 549 | 16.38 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 627 | 16.41 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 21 | 12 |
| 636 | 16.42 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 20 | 13 |
| 647 | 16.43 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 18 | 15 |
| 688 | 16.46 | humidity | 90 | 720 | > th | dose dependent | rect. | 14 | 12 |
| 692 | 16.47 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 853 | 16.51 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 869 | 16.52 | wind | 3 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 870 | 16.52 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 911 | 16.55 | wind | 3 | 4320 | > th | dose independent | rect. | 8 | 1 |