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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0155000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.96 (0.0895) R2 : 0.615
β1 : 3.13 (0.271) R2dD : 0.257 R2D : 0.0265
β2 : 2.63 (0.141) R2dC : 0.352 R2C : 0.252
β3 : 1.92 (0.928) R2dE : 0.0759 R2E : -0.0753
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 9.71 (2.29) R2dD*E : 0.301 R2D*E : -0.3
γ1 : 0.998 (0.115) R2dN8 : 0.1 R2N8 : -0.0539
σ : 0.929
deviance : 397.66
__
_____
C
peak time of C : 17.4
E
wheather : radiation
threshold : 20
memory length : 4321
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 17
open length of G : 3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
384.27 0.921 4.96 3.13 2.63 1.9 2.47 9.68 0.996 17.4 20 4321 17 3
430.33 0.974 5.34 2.63 3.07 -0.503 2.9 -- 0.691 17.7 86.98 7224 18 5.65
397.66 0.929 4.96 3.13 2.63 1.92 -- 9.71 0.998 17.4 20 4321 17 3
444.86 0.982 5.32 2.65 2.94 -0.478 -- -- 0.698 17.7 91.28 8701 18 5.72
679.49 1.21 5.04 2.76 -- 2.59 -- 9.84 0.79 -- 15.22 4324 17.2 4.71
439.17 0.982 5.34 2.62 2.76 -- 2.92 -- 0.656 17.4 -- -- -- --
460.33 1 5.33 2.61 2.78 -- -- -- 0.669 17.4 -- -- -- --
486.41 1.03 5.47 2.19 -- -2.34 -- -- 0.231 -- 85.83 9403 19.4 8
626.3 1.17 5.39 -- 3.03 -0.597 -- -- 0.44 17.8 106.8 8724 18.1 4.9
861.71 1.37 5.29 2.51 -- -- -- -- 0.601 -- -- -- -- --
639.48 1.18 5.39 -- 2.73 -- -- -- 0.379 17.5 -- -- -- --
630.84 1.17 5.47 -- -- -2.59 -- -- 0.215 -- 129.9 9520 18.9 6.33
1028.46 1.5 5.35 -- -- -- -- -- 0.322 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 386.66 radiation 20 4320 < th dose independent rect. 17 3
5 389.25 radiation 20 4320 < th dose independent rect. 17 7
6 389.65 radiation 20 4320 < th dose independent rect. 17 9
11 390.54 radiation 20 4320 < th dose independent rect. 17 12
14 392.15 wind 9 43200 > th dose independent rect. 3 13
17 392.27 wind 9 43200 > th dose independent rect. 24 16
25 392.85 wind 9 43200 < th dose independent rect. 3 13
41 393.12 wind 9 43200 > th dose independent rect. 8 7
43 393.14 radiation 10 4320 > th dose dependent rect. 17 14
50 393.38 radiation 20 4320 < th dose independent rect. 17 15
64 393.60 wind 9 43200 > th dose independent rect. 9 5
84 394.10 wind 9 43200 > th dose independent sin 2 NA
100 394.47 wind 9 43200 > th dose dependent rect. 10 6
101 394.52 wind 7 14400 > th dose dependent sin 6 NA
104 394.55 wind 7 14400 > th dose dependent rect. 21 18
109 394.72 wind 7 43200 > th dose dependent rect. 3 12
113 394.78 wind 9 43200 < th dose independent sin 2 NA
122 394.91 radiation 20 4320 < th dose independent rect. 6 2
129 395.01 wind 7 43200 > th dose dependent rect. 8 7
131 395.03 radiation 20 4320 < th dose independent rect. 19 13
144 395.18 radiation 20 4320 < th dose independent rect. 1 7
148 395.22 wind 9 14400 > th dose independent rect. 18 21
195 395.66 radiation 30 4320 < th dose independent rect. 16 17
216 395.84 wind 9 14400 < th dose independent rect. 18 21
245 396.08 wind 9 14400 < th dose independent sin 7 NA
256 396.23 wind 9 14400 > th dose independent sin 7 NA
267 396.32 radiation 10 4320 > th dose dependent rect. 6 1
270 396.36 humidity 50 43200 < th dose independent rect. 6 2
280 396.46 humidity 60 43200 > th dose independent rect. 10 2
283 396.51 wind 7 43200 > th dose dependent sin 2 NA
354 397.01 humidity 50 43200 > th dose independent rect. 21 11
428 397.63 humidity 50 43200 < th dose independent rect. 21 11
430 397.67 humidity 50 43200 > th dose independent rect. 6 2
454 397.81 humidity 50 43200 < th dose independent rect. 19 14
456 397.82 wind 9 43200 > th dose independent rect. 3 22
465 397.86 wind 9 43200 > th dose independent no NA NA
477 397.91 humidity 50 43200 > th dose independent rect. 19 13
514 398.04 wind 9 43200 > th dose independent rect. 6 23
520 398.07 wind 9 43200 > th dose independent rect. 11 23
533 398.14 humidity 50 43200 < th dose independent rect. 3 6
547 398.20 wind 9 43200 > th dose independent rect. 13 23
578 398.34 radiation 40 43200 < th dose independent rect. 10 1
593 398.39 wind 9 43200 > th dose independent rect. 15 23
639 398.62 wind 7 43200 > th dose independent rect. 10 2
649 398.67 wind 9 43200 < th dose independent no NA NA
667 398.73 humidity 60 43200 > th dose independent rect. 22 5
670 398.74 humidity 70 43200 > th dose independent rect. 24 2
677 398.76 wind 9 43200 < th dose independent rect. 13 23
681 398.79 wind 9 14400 > th dose dependent rect. 14 1
689 398.82 wind 9 43200 < th dose independent rect. 6 23
701 398.88 humidity 70 43200 < th dose independent rect. 24 2
705 398.88 wind 9 43200 < th dose independent rect. 11 23
731 399.03 humidity 60 43200 > th dose independent rect. 7 6
738 399.08 wind 7 43200 < th dose independent rect. 9 3
741 399.08 humidity 70 43200 < th dose dependent rect. 24 1
746 399.10 wind 9 43200 > th dose dependent sin 22 NA
769 399.19 wind 9 43200 < th dose independent rect. 15 23
790 399.28 humidity 60 43200 < th dose independent rect. 8 5
817 399.39 wind 9 43200 > th dose dependent rect. 11 22
828 399.42 temperature 20 4320 > th dose independent rect. 17 5
849 399.47 wind 1 43200 < th dose dependent rect. 2 1
880 399.54 humidity 70 43200 < th dose dependent rect. 23 3
889 399.62 humidity 50 43200 > th dose independent rect. 4 5
907 399.69 radiation 10 43200 > th dose independent rect. 17 1
945 399.80 humidity 70 43200 < th dose independent rect. 22 7
960 399.84 humidity 60 270 > th dose independent rect. 17 17
984 399.91 temperature 20 4320 < th dose independent rect. 18 1