FiT-DB / Search/ Help/ Sample detail
Os01g0154900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Esterase/lipase/thioesterase domain containing protein.
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
65.15 | 0.376 | 2.89 | -0.123 | 0.0196 | -2.39 | 0.208 | -22.4 | 0.0581 | 7.97 | 10.89 | 7 | -- | -- |
67.68 | 0.383 | 2.9 | -0.333 | 0.019 | 5.2 | -0.251 | -- | -0.033 | 5.36 | 10.86 | 105 | -- | -- |
64.93 | 0.375 | 2.88 | -0.12 | 0.0577 | -2.06 | -- | -22.7 | 0.0651 | 5.68 | 10.84 | 9 | -- | -- |
64.93 | 0.375 | 2.9 | -0.0706 | 0.0576 | 5.67 | -- | -- | 0.0651 | 5.68 | 10.86 | 79 | -- | -- |
65.1 | 0.376 | 2.88 | -0.118 | -- | -2.04 | -- | -22.6 | 0.0663 | -- | 10.83 | 8 | -- | -- |
96.41 | 0.46 | 2.9 | -0.155 | 0.0141 | -- | 0.335 | -- | 0.0422 | 7.37 | -- | -- | -- | -- |
96.71 | 0.461 | 2.9 | -0.147 | 0.0173 | -- | -- | -- | 0.0418 | 9.85 | -- | -- | -- | -- |
65.1 | 0.376 | 2.9 | -0.0692 | -- | 5.65 | -- | -- | 0.0663 | -- | 10.87 | 78 | -- | -- |
65.06 | 0.376 | 2.9 | -- | 0.0568 | 5.7 | -- | -- | 0.0731 | 5.73 | 10.85 | 73 | -- | -- |
96.73 | 0.46 | 2.9 | -0.148 | -- | -- | -- | -- | 0.0418 | -- | -- | -- | -- | -- |
97.28 | 0.461 | 2.9 | -- | 0.018 | -- | -- | -- | 0.0582 | 10.5 | -- | -- | -- | -- |
65.22 | 0.376 | 2.9 | -- | -- | 5.67 | -- | -- | 0.0741 | -- | 10.86 | 73 | -- | -- |
97.3 | 0.46 | 2.9 | -- | -- | -- | -- | -- | 0.0582 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|
1 | 64.87 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
9 | 64.87 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
221 | 74.14 | wind | 9 | 30 | > th | dose dependent | sin | 14 | NA |
291 | 80.44 | humidity | 80 | 10 | < th | dose independent | rect. | 3 | 3 |
303 | 80.44 | humidity | 80 | 30 | < th | dose dependent | rect. | 3 | 3 |
316 | 80.46 | humidity | 80 | 10 | < th | dose independent | rect. | 5 | 1 |
326 | 80.46 | humidity | 80 | 10 | < th | dose dependent | rect. | 5 | 1 |
360 | 82.16 | radiation | 1 | 90 | > th | dose independent | rect. | 4 | 1 |
370 | 82.16 | radiation | 1 | 90 | > th | dose dependent | rect. | 4 | 1 |
380 | 82.42 | wind | 9 | 30 | > th | dose independent | sin | 14 | NA |
411 | 83.85 | temperature | 20 | 90 | < th | dose dependent | rect. | 4 | 1 |
414 | 84.16 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 5 | 1 |
470 | 85.28 | wind | 9 | 30 | < th | dose independent | sin | 14 | NA |
480 | 85.32 | wind | 9 | 10 | > th | dose dependent | rect. | 19 | 21 |
673 | 86.97 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 15 | 1 |
675 | 87.02 | radiation | 1 | 10 | < th | dose dependent | rect. | 16 | 1 |
755 | 87.48 | wind | 9 | 30 | > th | dose dependent | no | NA | NA |
848 | 87.55 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 15 | 1 |
849 | 87.55 | humidity | 80 | 270 | < th | dose independent | rect. | 24 | 6 |
866 | 87.60 | humidity | 70 | 90 | < th | dose independent | rect. | 15 | 1 |
995 | 87.92 | radiation | 1 | 10 | < th | dose independent | rect. | 16 | 1 |