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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0154900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.9 (0.02) R2 : 0.332
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 5.67 (0.379) R2dE : 0.329 R2E : 0.326
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0741 (0.0422) R2dN8 : 0.00585 R2N8 : 0.00259
σ : 0.376
deviance : 65.22
__
_____
C
peak time of C : --
E
wheather : wind
threshold : 10.86
memory length : 73
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
65.15 0.376 2.89 -0.123 0.0196 -2.39 0.208 -22.4 0.0581 7.97 10.89 7 -- --
67.68 0.383 2.9 -0.333 0.019 5.2 -0.251 -- -0.033 5.36 10.86 105 -- --
64.93 0.375 2.88 -0.12 0.0577 -2.06 -- -22.7 0.0651 5.68 10.84 9 -- --
64.93 0.375 2.9 -0.0706 0.0576 5.67 -- -- 0.0651 5.68 10.86 79 -- --
65.1 0.376 2.88 -0.118 -- -2.04 -- -22.6 0.0663 -- 10.83 8 -- --
96.41 0.46 2.9 -0.155 0.0141 -- 0.335 -- 0.0422 7.37 -- -- -- --
96.71 0.461 2.9 -0.147 0.0173 -- -- -- 0.0418 9.85 -- -- -- --
65.1 0.376 2.9 -0.0692 -- 5.65 -- -- 0.0663 -- 10.87 78 -- --
65.06 0.376 2.9 -- 0.0568 5.7 -- -- 0.0731 5.73 10.85 73 -- --
96.73 0.46 2.9 -0.148 -- -- -- -- 0.0418 -- -- -- -- --
97.28 0.461 2.9 -- 0.018 -- -- -- 0.0582 10.5 -- -- -- --
65.22 0.376 2.9 -- -- 5.67 -- -- 0.0741 -- 10.86 73 -- --
97.3 0.46 2.9 -- -- -- -- -- 0.0582 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 64.87 wind 9 10 > th dose independent rect. 15 1
9 64.87 wind 9 10 > th dose dependent rect. 15 1
221 74.14 wind 9 30 > th dose dependent sin 14 NA
291 80.44 humidity 80 10 < th dose independent rect. 3 3
303 80.44 humidity 80 30 < th dose dependent rect. 3 3
316 80.46 humidity 80 10 < th dose independent rect. 5 1
326 80.46 humidity 80 10 < th dose dependent rect. 5 1
360 82.16 radiation 1 90 > th dose independent rect. 4 1
370 82.16 radiation 1 90 > th dose dependent rect. 4 1
380 82.42 wind 9 30 > th dose independent sin 14 NA
411 83.85 temperature 20 90 < th dose dependent rect. 4 1
414 84.16 atmosphere 1005 30 > th dose dependent rect. 5 1
470 85.28 wind 9 30 < th dose independent sin 14 NA
480 85.32 wind 9 10 > th dose dependent rect. 19 21
673 86.97 atmosphere 1005 10 > th dose dependent rect. 15 1
675 87.02 radiation 1 10 < th dose dependent rect. 16 1
755 87.48 wind 9 30 > th dose dependent no NA NA
848 87.55 atmosphere 1005 30 > th dose independent rect. 15 1
849 87.55 humidity 80 270 < th dose independent rect. 24 6
866 87.60 humidity 70 90 < th dose independent rect. 15 1
995 87.92 radiation 1 10 < th dose independent rect. 16 1