Os01g0154000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os01g0154000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.56 | 0.635 | 2.87 | 0.00611 | 0.0734 | 1.52 | 0.0255 | 4.7 | -0.101 | 0.341 | 33.03 | 3 | 5.46 | -- |
| 190.12 | 0.647 | 2.88 | 0.0129 | 0.0606 | 1.99 | -0.288 | -- | -0.0967 | 0.12 | 33.03 | 3 | 5.46 | -- |
| 182.15 | 0.633 | 2.87 | 0.0106 | 0.0619 | 1.59 | -- | 5.32 | -0.101 | 0.478 | 33.03 | 3 | 5.46 | -- |
| 190.47 | 0.647 | 2.88 | 0.0236 | 0.0633 | 2 | -- | -- | -0.0954 | 0.672 | 33.03 | 3 | 5.46 | -- |
| 182.38 | 0.632 | 2.87 | 0.0136 | -- | 1.54 | -- | 5.32 | -0.101 | -- | 33.03 | 3 | 5.46 | -- |
| 207.16 | 0.675 | 2.88 | 0.0457 | 0.0634 | -- | 0.434 | -- | -0.123 | 10.6 | -- | -- | -- | -- |
| 207.93 | 0.675 | 2.88 | 0.0626 | 0.0636 | -- | -- | -- | -0.122 | 9.74 | -- | -- | -- | -- |
| 190.71 | 0.646 | 2.87 | 0.0253 | -- | 1.96 | -- | -- | -0.0902 | -- | 34.09 | 3 | 5.54 | -- |
| 190.49 | 0.646 | 2.88 | -- | 0.0638 | 2 | -- | -- | -0.0979 | 0.686 | 33.03 | 3 | 5.46 | -- |
| 208.17 | 0.674 | 2.88 | 0.062 | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
| 208.03 | 0.675 | 2.88 | -- | 0.0635 | -- | -- | -- | -0.129 | 9.66 | -- | -- | -- | -- |
| 190.73 | 0.645 | 2.87 | -- | -- | 1.97 | -- | -- | -0.0929 | -- | 34.09 | 3 | 5.54 | -- |
| 208.27 | 0.674 | 2.88 | -- | -- | -- | -- | -- | -0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 180.95 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 31 | 180.99 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 91 | 183.99 | radiation | 40 | 10 | > th | dose independent | rect. | 14 | 21 |
| 123 | 185.03 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 2 |
| 176 | 185.90 | radiation | 40 | 10 | < th | dose independent | sin | 11 | NA |
| 177 | 186.04 | radiation | 40 | 10 | > th | dose independent | sin | 11 | NA |
| 197 | 187.72 | humidity | 80 | 10 | < th | dose independent | rect. | 5 | 1 |
| 202 | 187.72 | humidity | 80 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 218 | 188.52 | radiation | 30 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 270 | 189.66 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 2 |
| 332 | 190.47 | wind | 1 | 90 | < th | dose dependent | rect. | 24 | 1 |
| 366 | 190.76 | wind | 3 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 370 | 190.80 | humidity | 80 | 90 | < th | dose independent | rect. | 4 | 6 |
| 390 | 190.87 | radiation | 30 | 10 | > th | dose dependent | rect. | 14 | 21 |
| 474 | 191.61 | wind | 9 | 10 | > th | dose independent | rect. | 19 | 16 |
| 475 | 191.61 | wind | 9 | 10 | > th | dose dependent | rect. | 19 | 16 |
| 482 | 191.65 | wind | 9 | 10 | > th | dose independent | rect. | 21 | 14 |
| 485 | 191.65 | wind | 9 | 10 | > th | dose dependent | rect. | 21 | 14 |
| 487 | 191.66 | wind | 9 | 30 | > th | dose independent | rect. | 1 | 10 |
| 494 | 191.66 | wind | 9 | 30 | > th | dose dependent | rect. | 1 | 10 |
| 517 | 191.69 | wind | 5 | 10 | > th | dose independent | rect. | 10 | 1 |
| 521 | 191.69 | wind | 5 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 549 | 191.91 | wind | 7 | 30 | > th | dose dependent | rect. | 7 | 4 |
| 619 | 192.28 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 648 | 192.34 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 18 | 2 |
| 746 | 192.84 | wind | 3 | 10 | > th | dose independent | rect. | 5 | 2 |
| 750 | 192.86 | radiation | 30 | 10 | > th | dose dependent | sin | 11 | NA |
| 860 | 193.31 | temperature | 20 | 30 | > th | dose dependent | rect. | 9 | 2 |
| 932 | 193.64 | wind | 1 | 90 | < th | dose independent | rect. | 24 | 1 |
| 956 | 193.71 | wind | 9 | 30 | > th | dose independent | sin | 6 | NA |